Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01222 ATGGCGACTATGACGAGTTTGATCGGTCTCATCAACAAGATCCAACGTGCATGCACTGTCTTAGGTGACCACGGCGGCGAGGGTTTGTCACTCTGGGAAGCTCTTCCCTCGGTCGCCGTCGTTGGTGGACAGAGTTCAGGAAAATCGTCGGTGTTGGAGAGTGTGGTTGGAAGGGATTTTCTGCCTCGTGGATCTGGTATTGTCACACGGAGGCCGTTAGTGTTGCAACTTCACAAGACAGATGATGGACAACAAGATTACGCCGAGTTTCTTCATGCACCTAGAAAGAGATTCACTGATTTCGCTGCTGTAAGGCAGGAAATTTCAGATGAAACAGATCGTATAACTGGGAAGTCAAAGGCAATTTCAAACATTCCGATTCAACTCAGCATATATTCTCCAAATGTTGTGAACTTAACCCTCATAGATCTTCCAGGATTGACAAAGGTTGCTGTAGAGGGACAATCAGAAAGTATTGTTCAAGATATTGAAAACATGGTCCGATCTTATGTTGAGAAGCCTAACTGCATTATCTTGGCCATCTCTCCTGCAAATCAAGATATTGCTACTTCAGATGCAATAAAAATAGCAAAAGAAGTTGATCCTTCAGGTGACAGAACATTTGGAGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCTGTTGAGGTTCTGGAAGGAAAGCATTACAGGTTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCAGATATTAATAAAAACGTTGACATGATTGTTGCTCGCAAGAAGGAGCGTGAATATTTTGAGACGAGCCCTGAATATGGACATCTAGCACATAAAATGGGTGCAGAATATCTTGCCAAGCTTCTATCTGAGCATCTGGAGGTCGTCATTAGGCAGCGGATTCCTAGTATCATTGCCTTAATAAACAAAACCATTGACGAGCTTAATGCAGAGTTGGACCGTATTGGCAGGCCTATAGCTGTGGATTCAGGGGCCCAACTCTACACTATTTTAGAGATGTGTCGAGCATTTGACAAAGTATTTAAAGAACACATCGATGGAGGCCGTCCAGGTGGGGACAAAATTTATGGCGTTTTTGACAATCAATTACCGGCTGCTTTGAAAAAGCTCCCCTTTGATCGTCATCTTTCCATAAAAAACGTACAGCGAGTCGTTACAGAAGCCGATGGTTATCAGCCCCATCTGATTGCTCCAGAGCAAGGGTACAGAAGACTTATTGAAGGATGTTTAAGTTATTTCAAAGGCCCAGCTGATGCCTCTGTGGATGCGGTCCACCTTGTTTTAAAGGAACTTGTGCGAAAGGCAGCTGCAGCAACTGAGGAATTGAAGAGGTTTCCAACACTTAAAAATGAAATAGCTACAGCTGCAAATGATTCTTTGGAAAGATTCCGAGAAGAAAGTAGGAAGACAGTGACCCGGCTAGTTGATATGGAGTCTAGCTATCTAACAGTAGAATTTTTTCGGAAGATTCATCTTGAACCAGAAGCGAACCAGAACCAAAGTCGGAATACTCCTAATCCCAATCTGGACAATTTCTCAGATAATCACCTCAGGAAAATTGGATCAAATGTTAATGCCTATATCAACATGGTTTGTGACACACTTAAAAATTCTATACCAAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCGAAAAGATCATTGCTCAACCGATTTTATGTTCAAGTTGGGAGAAAAGAGAAGGAGCAACTTGGGACCATGTTGGATGAAGATCCTGCACTTATGGAAAAGAGATCACAATTAGCTAAAAGGCTTGAATTGTACAAACAAGCTAGGGATGACATTGATTCAGTGGCTTGGAAATAA 1845 0.4238 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDDGQQDYAEFLHAPRKRFTDFAAVRQEISDETDRITGKSKAISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQSESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAKEVDPSGDRTFGVLTKLDLMDKGTNAVEVLEGKHYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGAEYLAKLLSEHLEVVIRQRIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHIDGGRPGGDKIYGVFDNQLPAALKKLPFDRHLSIKNVQRVVTEADGYQPHLIAPEQGYRRLIEGCLSYFKGPADASVDAVHLVLKELVRKAAAATEELKRFPTLKNEIATAANDSLERFREESRKTVTRLVDMESSYLTVEFFRKIHLEPEANQNQSRNTPNPNLDNFSDNHLRKIGSNVNAYINMVCDTLKNSIPKAVVYCQVREAKRSLLNRFYVQVGRKEKEQLGTMLDEDPALMEKRSQLAKRLELYKQARDDIDSVAWK 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01222 614 Pfam Dynamin central region 222 489 IPR000375 -
Trre1g01222 614 ProSiteProfiles GED domain profile. 523 614 IPR020850 -
Trre1g01222 614 Pfam Dynamin family 38 213 IPR045063 -
Trre1g01222 614 Pfam Dynamin GTPase effector domain 521 611 IPR003130 GO:0003924|GO:0005525
Trre1g01222 614 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Trre1g01222 614 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Trre1g01222 614 PANTHER DYNAMIN 6 611 IPR022812 -
Trre1g01222 614 PRINTS Dynamin signature 183 201 IPR022812 -
Trre1g01222 614 PRINTS Dynamin signature 202 218 IPR022812 -
Trre1g01222 614 PRINTS Dynamin signature 35 53 IPR022812 -
Trre1g01222 614 PRINTS Dynamin signature 60 77 IPR022812 -
Trre1g01222 614 PRINTS Dynamin signature 133 150 IPR022812 -
Trre1g01222 614 PRINTS Dynamin signature 225 244 IPR022812 -
Trre1g01222 614 Gene3D - 4 310 IPR027417 -
Trre1g01222 614 Gene3D Dynamin, middle domain 334 591 - -
Trre1g01222 614 SMART GED_2 518 611 IPR003130 GO:0003924|GO:0005525
Trre1g01222 614 FunFam dynamin-related protein 1E 4 310 - -
Trre1g01222 614 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Trre1g01222 614 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Trre1g01222 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Trre1g01222 614 MobiDBLite consensus disorder prediction 501 520 - -
Trre1g01222 614 FunFam Dynamin-related protein 1C 332 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01222 Trre-Chr1 9268832 9276249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01222 1 9268832 9276249 Trre1g01222 1 9268832 9276249 ECH