Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01221 ATGGAAGAAATTTTCGGTGACGGAGGTGGAGTTGCGACACCGGTGCCGCTTTCGGTGTCCGGATCGTTTAGAGAAGGGAGAGGCTCGTCGAGGAGACGTGGTTCTGCTAGACAGCCGAGTATGGATGCTGATGAGTTCATGAATTTGTTGCACGGTTCGGATCCAGTGAAGGTGGAGCTTAATCGTCTCGAGAATGAAGTTCGAGATAAGGATAGGGAATTATCAGAAGCACAAGCTGAGATTAAAGCTTTGAGGCATTCTGAACGATTAAGAGAAAAAGCTGTTGAAGAGCTATCTGACGAGCTGTCAAAGGTTGACGGGAAGCTGAAATTAACTGAATCTCTATTAGAAAGCAAAAATCTCGAAATAAAGAAAATCAATGACGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCAGAAGCTACTCTTCGAAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCCATAGAAGCAATTCTTGCTCCTTTGGAGGCTGAACTAAAACTTGCTCGACAAGAGATTGCTAAACTACAAGATGACAACAAAGCTTTAGATCGTCTTACGAAATCCAAAGAAGCTGCACTACTTGAAGCTGAAAAGACTGTTCAGTTTGCCATGGCTAAGGCCTCCATGGTGGATGATCTCCAAAACAAAAATCAAGAGCTGATGAAACAGATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGACAGAATGCATAGACAAAAGGTGGCAGAGGTTGAAAAGCTGACCCAAACTGTGAGGGAGCTAGAAGAGTCAGTCCTTGCAGGTGGTGCAGCAGCAAATGCAGTGAGAGATTATCAACGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTTAATAGGGAGTTGGGCCGTGCCAAGGTTACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGTTATGCCTGTCAAACAGTGGCTTGAAGAGCGACGATTCTTGCAGGGGGAAATGCAACAACTTCGTGATAAGCTTGTTATAGTTGAGCGCACTGCAAAATCTGAAGCACAATTGAAAGAAAAATACCAATTACGGCTTAAAGTCCTTGAGGAGAGTTTGAGGGGCAATTCTAGTGGCAGTAGTCGCAGCATCGCAGAGGGAAGAAGTACAAACAGTGGTTCTTCTCGTCGCCAGTCACTAGGTGGAGCTGATAATATCTCAAAACTAACCTCTAATGGATTCTTGCCTAAGAGAACACCATCCCCTCAACTCAGGTCATCCCTATCATCTAGTTCAATATTGAGGCATGCTAAAGGATCATCTAAATCTTTTGATGGTGGCTCAAGGACACTGGACAGGAGTAAAACGCTGCTCAGTGGAGCTCCTCAAAGTTACTCATTCAACCAATCTCGTGAAGAAACCAAAGAGAGAGAGGCAGATGATAATTGGAAAGGAAATTCAGGTGATAAGCCAAATGACTTTCCACCGGTGGATACAGAGGATAGTATTCCAAGTGTTTTATATGACCTCTTGCAGAAAGAGGTCATTGCTTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGCCTAAAAGATAAAGATGATGCCATTGAGATGTTAGCAAGGAAGGTGGATACATTGACCAAAGCCATGGAAGTTGAGGCGAAAAAGATGAGAAGAGAAGTAGCTGCCATGGAAAAGGAGGTAGCTGCTATGCGTGTTGATAAAGTACAAGAGAACAGAGCAAAGCGGTTCAGCAATGTAAAGGGCCCTGTAAACAGTGCTCAGAATCAGCTTATTTCTGGAAGAAATGTGACACGAGCAGGATTGACACGGAGCACCCAATAA 1842 0.4354 MEEIFGDGGGVATPVPLSVSGSFREGRGSSRRRGSARQPSMDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELSDELSKVDGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAEKTVQFAMAKASMVDDLQNKNQELMKQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEESVLAGGAAANAVRDYQRKVQEMNEERKTLNRELGRAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLVIVERTAKSEAQLKEKYQLRLKVLEESLRGNSSGSSRSIAEGRSTNSGSSRRQSLGGADNISKLTSNGFLPKRTPSPQLRSSLSSSSILRHAKGSSKSFDGGSRTLDRSKTLLSGAPQSYSFNQSREETKEREADDNWKGNSGDKPNDFPPVDTEDSIPSVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLARKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVDKVQENRAKRFSNVKGPVNSAQNQLISGRNVTRAGLTRSTQ 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01221 613 Coils Coil 109 129 - -
Trre1g01221 613 Coils Coil 215 263 - -
Trre1g01221 613 Coils Coil 60 87 - -
Trre1g01221 613 Pfam Microtubule-associated protein 70 44 594 IPR009768 GO:0007010|GO:0008017
Trre1g01221 613 MobiDBLite consensus disorder prediction 374 500 - -
Trre1g01221 613 MobiDBLite consensus disorder prediction 374 468 - -
Trre1g01221 613 Coils Coil 274 301 - -
Trre1g01221 613 MobiDBLite consensus disorder prediction 469 486 - -
Trre1g01221 613 Coils Coil 163 190 - -
Trre1g01221 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 39 592 IPR009768 GO:0007010|GO:0008017
Trre1g01221 613 Coils Coil 323 350 - -
Trre1g01221 613 MobiDBLite consensus disorder prediction 1 43 - -
Trre1g01221 613 MobiDBLite consensus disorder prediction 585 613 - -
Trre1g01221 613 Coils Coil 546 573 - -
Trre1g01221 613 MobiDBLite consensus disorder prediction 583 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01221 Trre-Chr1 9260825 9265962 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01221 1 9260825 9265962 Trre1g01221 1 9260825 9265962 ECH