Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01213 ATGGCGGAAGCTCTCTCTGTGATGCCAGCGGCCGTACTACGTAATCTTGCTGATAAGCTTTATGAGAAACGCAAAAATGCTGCTCTTGAGGTTGAGGGGATTGTTAAACAGCTTGCTTCTGCTGGGGATCATGATAAAGTAACTGCTGTGATCACTTTGTTGACTACGGAATTCACGTATTCGCCGCAAGCGAATCATCGCAAGGGAGGGTTGATAAGTTTGGCTGCTGCTACTGTTGGGCTGACTAATGGAGCTGCTCAGCATCTTGAGCAAATTGTGCCTCCAGTGTTAAATTCTTTCTCGGATCAAGATAGCAGAGTTCGTTATTATGCATGTGAAGCACTATATAACATTGCTAAGGTTGTGAGAGGAGATTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTAGTGCAGATTCAGATGGCAATGTACAAAGTGCTGCACATCTCTTAGATCGACTCGTGAAGGATATTGTGACCGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCGTTATTGAGGGAGCGCATGAATGTACTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTACCTGATTTTCTTGATGGTTTGTTTAACATGTTGAGCGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCACGAGATAAAGAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCTGGTTCTTCAGATGAATTTACTAGGCTAACTGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGGGACCAGCTTGTTCCATACTATGCTGACATTCTTGGAGCTATTTTGCCTTGCATATCCGATAAAGAAGACAAAATTAGAGTGGTTGCTAGGGAGACCAATGAAGAGCTACAAGCAATCAATGCCGAACCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCAATTGCTAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGGATCGAAGCTTTGCACTGGATATCAATCCTTTTAAACAGACATCGTATTGAGGTTTTGACATACCTTAATGATATATTTGACACCCTACTGAAAGCACTTTCAGATCCATCTGATGAGGTTGTTCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAGAGATCCTCAGCACTTCCGTCATCTTGTCGTTTTCCTTGTGCACAATTTCAAGCTAGATAATTCTCTTTTGGAGAAGCGCGGGGCTTTGATAATTCGTCGCCTTTGTGTGCTATTGAATGCCGAGAGAGTCTACCGTGAACTTTCTACAATATTAGAAGGAGAATCGGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCGGAATTGTCTGAGATTCGAGATCTTTTGAAGCAGTCACTGGTAAATCCTGCCGGGAAGGACTTGTATGTTTCTTTGTATGCCTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTTTTAGCTCAGACTTACCGACATGCAAGTGCTGTGATTCAATCTCTAGTAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAATTGGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTATCTTAGATTGCAGCTTCTCGATCCTGGAAGATATTTATGGCTATTCAAAGCATTGTATGGTCTTTTGATGTTGCTTCCTCAGCAAAGTGCAGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCATATTCTTTCAATCGAGAGCAACTGAATAGGATGCCTTCTGGGGATTACTACCAATTTGTTCCTCAGATGCCTGATGGCAGTCAAACAGAAGAGGATGGTGGGAGCTCATATAATGGTTTAAACTTTGCTGCAAGGTTACAACAGTTTCAGCAAATGCAGCAGCAACATAGGGTACACACTAAATCGCGAAGAACATCACGCAGTTTATCCACTTCCTTACCAAAGGAGGCGCAAAAAGAGGAAGAACCACATAGACCTCAGTCTATTGATCTTAATGTTCCTCCTTCAAGATCAAGGAGAAATTCAGGGCAACTACAACTATAA 2154 0.4136 MAEALSVMPAAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDKVTAVITLLTTEFTYSPQANHRKGGLISLAAATVGLTNGAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDGNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLHEIKNSPSVDYGRMAEILVQRAGSSDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEDKIRVVARETNEELQAINAEPAEAFDVGAILSIARRQLSSEWEATRIEALHWISILLNRHRIEVLTYLNDIFDTLLKALSDPSDEVVLLVLDVHACIARDPQHFRHLVVFLVHNFKLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYRHASAVIQSLVEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLDPGRYLWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNREQLNRMPSGDYYQFVPQMPDGSQTEEDGGSSYNGLNFAARLQQFQQMQQQHRVHTKSRRTSRSLSTSLPKEAQKEEEPHRPQSIDLNVPPSRSRRNSGQLQL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01213 717 MobiDBLite consensus disorder prediction 661 717 - -
Trre1g01213 717 FunFam protein VAC14 homolog 126 248 - -
Trre1g01213 717 Gene3D - 237 409 IPR011989 -
Trre1g01213 717 FunFam protein VAC14 homolog isoform X1 249 410 - -
Trre1g01213 717 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Trre1g01213 717 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Trre1g01213 717 PANTHER TAX1 BINDING PROTEIN-RELATED 7 678 IPR026825 GO:0006661|GO:0070772
Trre1g01213 717 MobiDBLite consensus disorder prediction 701 717 - -
Trre1g01213 717 FunFam ARM repeat superfamily protein 7 125 - -
Trre1g01213 717 Gene3D - 8 225 IPR011989 -
Trre1g01213 717 SUPERFAMILY ARM repeat 11 542 IPR016024 -
Trre1g01213 717 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01213 Trre-Chr1 9170285 9177648 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01213 1 9170285 9177648 Trre1g01213 1 9170285 9177648 ECH