Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2001 ATGGCCACTCTACCTTTCATGTCTTTTGTTGTCATGTTACTATTGTTTTCCACCCAAATTTCATCTGATACAGATATCATAACTCAGTTTCATTCTCTTCATGATGGAACCACCAACACATTGGTTAATGGAACATTTGAGTTGGGTTTCTTTAGTCCAGGTAGTTCCACAAATCGCTATGTAGGAATATGGTTCAAGAATATCCCAATAAAAACGGTTGTTTGGGTAGCCAATCGTGACCATCCAATTAGTGACAAATCCGGCATATTGAGCATAAACAAAGAAGGAAACCTTGTCCTTTTCAGCAAAAATGGCACAACTCATTGGTCAACAAATATAACAACCAAATCCTCAACCTCAAGCTTCATAGCACGGCTCTTAGGTACCGGCAACTTGGTCCTAAATGATGAGAAAGAAAATAACGGTTATGATGTGTACTTGTGGCAGAGCTTTGACTATCCTACTGATACATTTCTTCCAGGAATGAAGGTTGGGTGGAACCTAACAAGCGGTCTTAATAGGCGCCTAACAGCTTGGAACAATTGGGACGACCCTTCTTCAGGTCAAATTACTTATGGCTTGATAAGAAGTGACATTCCTGAAACAAAGATACAAAACGGTTCGTTAGTTTTATATAGAAGTGGACCTTATAATGGCCTTCGTTTCGGTGCTACACAAAAATTGAAACATGTTCCATTATTCATTCTCAATTTTTTCTACAAAAAAGATGAGTATTATTTCACTTACCAACCCAGGAATCAGTCAATACTTTCAAGATTTGTCATCAACCAAACTGTTTCTGCTCTTCAGGTCTTAAAGTGGACAGAAGGGAAACAAAGATGGATGCTTCATTCAAATATTCCGAGAGACGAATGTGATAACTACAACCGTTGTAGTTCGTTTGGGATCTGTGGCATGATGGGTAAGTCCTCCACATGTGAGTGCTTAAGTGGATTCACTCCAAAATCGCCTCAAAATTGGAAAGTGAAGGACCGGAGTGAAGGATGCGTGCGGAGTGAAAATTGGAGCTGTAGAGAGAAAAATAAAGATGGGTTCATCAAATTTCAAAATATGAAGGTCCCAAACACTAAGATATCTTGGATAAATAGAAGTATGACACTTGAGAAATGTAAGACCAAATGTTGGGAGAATTGTTCCTGTACAGCTTATGCTAACTCAAACATCATTGAGGATGGAAGTGGTTGCATCCTCTGGTTTAGTGATCTCTTGGACTTGAGACAATTACCCGATTCGGGGCAAGATCTTTATGTTAGATCCCATACCTCGGAAATAGCAAACAGAGATGGTTCAAGGAAAATGGTAGCCGTGGTCACAAGTACCACTTCATTAATTATTGTGATGCTTTTGCTATTTACCATACTTTTTTGTTGGAGGAGAAAAGTTAAATCTAAATCTAGAGAGGAAATAGGAATCATGAAGACAACAATAAAGAAAAGCGAAGGTGAACAAGAAGACATGGAGCTACCTTCCTTTGACTTTGGTAGAATAGCATTTGCCACTAACGACTTCTCAAAAAATAACAAGCTTGGCGAAGGTGGTTTTGGTCCAGTGTATAGGGGAACATTACCAGATGGACAAGATATCGCAGTTAAAAGGCTTTCACATAGCTCCAAACAAGGAACAAAAGAATTTAAGAATGAGGTTATATTTTGTTCCAAACTCCAACATCGAAACCTAGTTAAGGTCCTTGGCTTTTGCATTGAAGAAGAAGAGAAACTACTCATCTATGAATATATGCCCAACAAAAGCTTAGACTTCTTTCTTTTTGATTCTTCTCGAAGTAAATTTTTAGACTGGTCTAAGCGGTTTGACATTATCGGTGGTATTGCTAGAGGAATTCTTTACCTTCACCAGGACTCTAGACTAAGGGTCATACATAGAGATTTAAAAGCAGGTAATATTTTATTAGACAATGATATGAGTCCCAAAATTGCTGATTTTGGCCTGGCTCGAATGTGCGGAGGTGACCAGATTCAAGGAAACACAGATATAGTTGTTGGTACATATGGTTATATGGCACCCGAGTATGCAATTGATGGGATATTCTCCATCAAATCAGATGTATATAGCTTTGGAATTTTATTATTAGAGATTATAAGCGGAAAGAAAAATAAAGGACTTTCCTATTCAAATCACAACTACAATCTTGTTTCACATGCATGGAGATTGTGGAAAGAGTGCATCCCAATGGAATTCATGGATACTTGTTTGGAGGAGGGTTCATATATCTCATCTGAAGTCTTGAGATGCATTCATATTGGTCTTTTATGTGTGCAACACCATCCTAATGATAGACCAACTATGACATCTGTGCTTGTAATGCTAACTAGCGAAAATACTTTACCACACCCGAAAGAGCCTATCTTCCTAATTGAAAAGGTTTCAGATGGGAAAGAATCTACTTCTGGACATGAAATGTACAATTTAACAAATGAAGAATCTAGGTCAATATTGGAACCTAGATAG 2487 0.3804 MATLPFMSFVVMLLLFSTQISSDTDIITQFHSLHDGTTNTLVNGTFELGFFSPGSSTNRYVGIWFKNIPIKTVVWVANRDHPISDKSGILSINKEGNLVLFSKNGTTHWSTNITTKSSTSSFIARLLGTGNLVLNDEKENNGYDVYLWQSFDYPTDTFLPGMKVGWNLTSGLNRRLTAWNNWDDPSSGQITYGLIRSDIPETKIQNGSLVLYRSGPYNGLRFGATQKLKHVPLFILNFFYKKDEYYFTYQPRNQSILSRFVINQTVSALQVLKWTEGKQRWMLHSNIPRDECDNYNRCSSFGICGMMGKSSTCECLSGFTPKSPQNWKVKDRSEGCVRSENWSCREKNKDGFIKFQNMKVPNTKISWINRSMTLEKCKTKCWENCSCTAYANSNIIEDGSGCILWFSDLLDLRQLPDSGQDLYVRSHTSEIANRDGSRKMVAVVTSTTSLIIVMLLLFTILFCWRRKVKSKSREEIGIMKTTIKKSEGEQEDMELPSFDFGRIAFATNDFSKNNKLGEGGFGPVYRGTLPDGQDIAVKRLSHSSKQGTKEFKNEVIFCSKLQHRNLVKVLGFCIEEEEKLLIYEYMPNKSLDFFLFDSSRSKFLDWSKRFDIIGGIARGILYLHQDSRLRVIHRDLKAGNILLDNDMSPKIADFGLARMCGGDQIQGNTDIVVGTYGYMAPEYAIDGIFSIKSDVYSFGILLLEIISGKKNKGLSYSNHNYNLVSHAWRLWKECIPMEFMDTCLEEGSYISSEVLRCIHIGLLCVQHHPNDRPTMTSVLVMLTSENTLPHPKEPIFLIEKVSDGKESTSGHEMYNLTNEESRSILEPR* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2001 828 ProSiteProfiles Protein kinase domain profile. 510 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2001 828 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Tpr7g2001 828 SMART blect_4 30 154 IPR001480 -
Tpr7g2001 828 Gene3D Transferase(Phosphotransferase) domain 1 586 792 - -
Tpr7g2001 828 CDD EGF 291 320 - -
Tpr7g2001 828 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 804 - -
Tpr7g2001 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Tpr7g2001 828 SMART ntp_6 347 426 IPR003609 -
Tpr7g2001 828 Gene3D - 18 151 IPR036426 -
Tpr7g2001 828 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Tpr7g2001 828 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 804 - -
Tpr7g2001 828 SUPERFAMILY Protein kinase-like (PK-like) 496 797 IPR011009 -
Tpr7g2001 828 CDD STKc_IRAK 516 783 - -
Tpr7g2001 828 Pfam D-mannose binding lectin 72 179 IPR001480 -
Tpr7g2001 828 Gene3D Phosphorylase Kinase; domain 1 470 585 - -
Tpr7g2001 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Tpr7g2001 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Tpr7g2001 828 SMART serkin_6 510 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2001 828 Pfam PAN-like domain 344 412 IPR003609 -
Tpr7g2001 828 ProSiteProfiles EGF-like domain profile. 288 325 IPR000742 -
Tpr7g2001 828 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Tpr7g2001 828 CDD PAN_AP_plant 343 425 - -
Tpr7g2001 828 CDD B_lectin 32 154 IPR001480 -
Tpr7g2001 828 Pfam Protein tyrosine and serine/threonine kinase 512 779 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2001 Tpr-Chr7 24533845 24537767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2001 440 807 Receptor kinase-like Gene Family AT4G23190 53.581 1.00e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g2001 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2001 7 24533845 24537767 Tpr7g2001 7 24533845 24537767 ECH