Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1994 ATGAAAATTGTTTATACCATGCTTGTTGTTACTAAGCTACTATTATTATTCTTGTTCAAATTATCCTCTGCTACTGATACTATTACACAATCAGAATCACTTTCTGATGGAAGCACCTTGATTTCTAAAGATGGAACCTTTGAGTTGGGTTTCTTTAATCCAGGTAACTCACCAAACCGTTATGTTGGAATTTGGTACAAAAATATTCAAGTTAAAACAGTTGTTTGGGTTGCGAATCGTGATAATCCGATCAAAGATAAGTCGAGCAAGTTGATCATAAACAAACAAGGAAATCTTGTTCTTCTCAATAATAGTGATTCTCTTTTATGGTCAACAAATGCAACAAAGAAAACTTCAAGTCCAATTGTGCAGCTCTTGAACAATGGAAATTTAGTTCTTCGAGACGAGAAAGACAATGAAGGTGTTGAAGAAGAAGAAGACGGTTTCTTGTGGCAGAGTTTTGATTATCCTTGTGATACATTATTACCAGGAATGAAGTTGGGATGGAACAAGAAAACCGGTATTAATAGACGTCTCACTGCATGGAAAAATTGGGAAGATCCTTCTTCAGGTGAATTTACTAATTCAATTAAACTTAACAAAAATCCTGAAATTGTATTTTGGAAAGGTTCTGTTGAGTTTTATAGAGCAGGACCTATGATTGGTATTATGAATAGTGCTGTTATGTCTAAAGGAGTTTTTGGGTTGAGGCCTAATCCACTTTATAATTATACATTTGTATATAATGAAGATGAAGTTTATTATATGTACAACCTTAAGAATAGTTCTGTGATTTCCATAGTTGTTTTGAACCAAACGCTTTTGGTTCGTCAACGCCTCACTTGGATTCCGGAAACTAAAACATGGAATCTTTACCAGAATTTGCCACAAGACAGTTGTGATGCTTATAATATTTGTGGTGCAAACGCAAACTGTGTCATTGGCGAATCACCAATTTGTGAGTGCTTAGATGGGTTTACGCCAAAATCACCCAATCGGTGGAATGCAATGGACTGGTCACAAGGATGTGTACGGATTGGAAATTGGACCTGTGGAGTCAAGAGTAGAGACGGTTTCCGTAGAGTTGCTAAAATGAAGTCGCCAGATACTACAAATTATTGGCTTAATGAAAATATGACGCTCGATAAATGCAAGGATATGTGTTTGCAAAATTGTTCCTGCACGGCTTACTCAATCTTAGGCGCAGATGATGGAAACAACGGATGTTCCATTTGGTTTCATGATCTTAAAGATTTGAGAGTTTCAGAAGTTGGACAAGACTTGTATGTTCGAGCAGACGTTTCAGATATCGATGATAAACATGGGAATGTGAAAAAAGTAATTGTTGCAGTTTCAATCAGTGCTTCATTTGTCATTGTGATGGTATTATTAGCATTCTACATTTATAGAACAAAGTATAAAGTTAATGAGGACAAGGTAAACTCAATGTGGATGGAAGACAACAGTGAAAGTGAACATGACGATTTCGAGCTTCCTTTCTTTGATCTTGCTACAATACTAGATGCCACAAATGATTTCTCGATTGACAACAAACTCGGTGAAGGTGGTTTTGGATCGGTATACAAGGGTAAGTTGGTAGATGGCCAAGAAGTTGCAGTTAAAAGGCTTTCTTGGGGTTCCGGACAAGGAACGAAAGAATTTAAGAATGAAGTTATATTATGTGCTAAACTTCAACATCGAAATCTTGTTAAAGTTATTGGTTGTTGCATTGAAAAAGATGAGAAAATGCTACTCTATGAATATATGTCAAACACAAGCCTTGATTCATTTATTTTTGATCCAATTCAAAGTAAATCGTTAGATTGGTCTTTGCGATTTAACATCCTATATGGAATTGCACGTGGTCTTCTTTATCTACATCAAGATTCAAGATTAAGAATAATACACAGAGATTTGAAGGCAAGTAATATTCTATTAGACAAAGATATGAATCCAAAAATTTCAGATTTTGGCTTGGCTAAAATGTTTGGAGGTGACCAAACTGAAGGAAAGACAAATCGAATAATTGGCACATACGGTTATATGGCACCTGAATATGCCATTGACGGACTATTCTCTAGTAAATCTGATGTTTTTAGTTTTGGGGTATTATTGCTGGAACTTATAAGTGGGATGAAAAATAGAACGCGTACCTACCATCAACATGATCACAATCTTATCGGACATGCATGGAGATTGTGGAAAGAGGGAATGATACACACATTGATTGATGAGAATTTGATGGAAACATGCAATGTAAATGAAGCTTTACGGTGCATTCAAATAGGTCTTTTATGTCTACAACATCATCCAGATGATCGACCAAACATGACATCTGTGGTTGTGATGTTAAAAAGTAATAATGTTATACCTCAACCACAAGAGCCAGGTTATTTATTAAAAACTGCACCAATAGAAAGAGAACTTTTTTCTTCAGACGGAGAAACATCATCTTCAATAAATCAAGTAACTATTTCAATATTAGATGTTAGATAA 2496 0.3538 MKIVYTMLVVTKLLLLFLFKLSSATDTITQSESLSDGSTLISKDGTFELGFFNPGNSPNRYVGIWYKNIQVKTVVWVANRDNPIKDKSSKLIINKQGNLVLLNNSDSLLWSTNATKKTSSPIVQLLNNGNLVLRDEKDNEGVEEEEDGFLWQSFDYPCDTLLPGMKLGWNKKTGINRRLTAWKNWEDPSSGEFTNSIKLNKNPEIVFWKGSVEFYRAGPMIGIMNSAVMSKGVFGLRPNPLYNYTFVYNEDEVYYMYNLKNSSVISIVVLNQTLLVRQRLTWIPETKTWNLYQNLPQDSCDAYNICGANANCVIGESPICECLDGFTPKSPNRWNAMDWSQGCVRIGNWTCGVKSRDGFRRVAKMKSPDTTNYWLNENMTLDKCKDMCLQNCSCTAYSILGADDGNNGCSIWFHDLKDLRVSEVGQDLYVRADVSDIDDKHGNVKKVIVAVSISASFVIVMVLLAFYIYRTKYKVNEDKVNSMWMEDNSESEHDDFELPFFDLATILDATNDFSIDNKLGEGGFGSVYKGKLVDGQEVAVKRLSWGSGQGTKEFKNEVILCAKLQHRNLVKVIGCCIEKDEKMLLYEYMSNTSLDSFIFDPIQSKSLDWSLRFNILYGIARGLLYLHQDSRLRIIHRDLKASNILLDKDMNPKISDFGLAKMFGGDQTEGKTNRIIGTYGYMAPEYAIDGLFSSKSDVFSFGVLLLELISGMKNRTRTYHQHDHNLIGHAWRLWKEGMIHTLIDENLMETCNVNEALRCIQIGLLCLQHHPDDRPNMTSVVVMLKSNNVIPQPQEPGYLLKTAPIERELFSSDGETSSSINQVTISILDVR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1994 831 CDD B_lectin 31 157 IPR001480 -
Tpr7g1994 831 CDD STKc_IRAK 519 785 - -
Tpr7g1994 831 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Tpr7g1994 831 Pfam S-locus glycoprotein domain 229 330 IPR000858 GO:0048544
Tpr7g1994 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 188 IPR036426 -
Tpr7g1994 831 Gene3D - 20 154 IPR036426 -
Tpr7g1994 831 SMART blect_4 31 157 IPR001480 -
Tpr7g1994 831 Pfam D-mannose binding lectin 73 183 IPR001480 -
Tpr7g1994 831 Pfam Domain of unknown function (DUF3403) 789 831 IPR021820 GO:0004674
Tpr7g1994 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Tpr7g1994 831 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Tpr7g1994 831 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Tpr7g1994 831 Gene3D Transferase(Phosphotransferase) domain 1 589 794 - -
Tpr7g1994 831 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Tpr7g1994 831 ProSiteProfiles Protein kinase domain profile. 513 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1994 831 Pfam PAN-like domain 351 418 IPR003609 -
Tpr7g1994 831 CDD PAN_AP_plant 350 431 - -
Tpr7g1994 831 Gene3D Hepatocyte Growth Factor 350 429 - -
Tpr7g1994 831 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 824 - -
Tpr7g1994 831 Gene3D Phosphorylase Kinase; domain 1 474 588 - -
Tpr7g1994 831 SMART serkin_6 513 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1994 831 PIRSF SRK 1 831 IPR024171 GO:0004674
Tpr7g1994 831 SMART ntp_6 354 432 IPR003609 -
Tpr7g1994 831 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 824 - -
Tpr7g1994 831 SUPERFAMILY Protein kinase-like (PK-like) 496 799 IPR011009 -
Tpr7g1994 831 Pfam Protein tyrosine and serine/threonine kinase 514 783 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1994 Tpr-Chr7 24463746 24466985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1994 438 817 Receptor kinase-like Gene Family AT4G23190 50.258 1.99e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1994 PK_Tyr_Ser-Thr 1.3e-48 CL0016