Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1993 ATGAAGTTGGGTTGGAATCTTAGAACTCATACGGAAACGAGAATGACATCTTGGAAAAGTCCTGAGGATCCATCACCTGGAGACTTTTATTTGGGTTATTTGCTTTATAATTATCCTGAACAATATTTGATGCTAGGAACAAAGAAATTTATAAGACTTGGACCATGGAATGGATTGCATTTTAGTGGTATACCAGGTCAAAAGCCAAACAACATTTTTGCTTCCGGCCATGTGTCTACGAAGGATGAAATTTATTCTTTTTATACTTTGAAGAATGATTCTGTCATTTCAAGAATGGTAATGAATCAAACCACATTGAACTACACTCGATACTTGTGGATGGAAGATCAACAAAATTGGAAAGTTCTTAAATCAATACCTAAAGACGTGTGTGACTATTATGGAACCTGTGGAGCTTATGGTACTTGCATAATCACAGGTTCACAAATATGTGAATGTTTATCAGGTTTTAGCCCCAAATCTCCAGTTGCTTGGAATGCAACTGATTGGAATCAAGGATGTGTCCGAAATAAACCGTTAAATTGCACTAACAAACTCAAGGATGGATTTGTTAAAGTGAAAGGTCTAAAAGTGCCAGATTGTACACATACTTGGGTAGATCAAACCATAGGTCTACATGAATGTAGAGTCAAGTGCTTGAATAATTGTTCTTGTATGGCTTATACTTATGCAAATATAACAGGAGAAGGCAGTGGCTGTGTCATATGGTTTGGTGATTTAATTGATATTAGGAAGTTTGAAGATGATGGACAGGATCTTTATATTAGAATGGATGCTTCTGAATTTGGCAAAGAGGGACATGATGAGCTCAAGAATGATTTGATAAGAATACTTACTAGCACCATTGTAGTTTCTGGGATACTTTTTCTTGGATATTACCGCTACATATTGTGGAGGAGGAGGAGGAGAATAACTGAGGATTCAGAAGTTATCGATCTGGAAGGTGACAACGGTAGTGAGGACCAGGATGATCTCGATCTCCCATTGCTTGCATATTCAACCTTAGTCACTGCCACTAATAACTTCTCGATAAAGAACAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAAGATTGGTATGCGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGTGACTCTGGACAAGGAATTACTGAGTTTAAGAATGAAGTAAAGCTTATAGCAAAACTTCAACACCGGAATCTTGTTAAACTTCTTGGATGCTGTATCGAGGAAGAAGAGAGAATGCTAGTTTATGAATACATGAACAACTGTAGCTTGAATAGGTTTATTTTTGATGATACTAAAAGCAAACTTCTAGATTGGCCTAAGCGCTTCAACATTATTTGCGGAATTGCTCGAGGTCTTCTTTATCTTCATCATGATTCTAGATTGAGGATAATTCATAGAGACCTCAAACCAAGCAATATTTTGCTTGATGACAGGCTGAACCCGAAAATATCAGATTTTGGTATAGCTAGAATTTTCGGATTAGATCAAACACATGGAAATACCAAGCGAGTGGTTGGAACATATGGCTACATGGCACCAGAATATGCTGTTGATGGACTTTTTTCTGTGAAATCTGACGTGTTTAGCTTTGGAATTTTGATGCTGGAGATTATATGTGGGAAGAGAAGTAGAGGTTTTTATGTCGAAAATGACTCTCCTAACCTCGTCACTCATGCATGGAGTTTATGGAAAGAGGGAAGGGCTTTAGAACTAGTTGACAAAAACATAGAGGATTCTTGTGTTGAATCAGAGGTATTGCGTTGCATTCATACCAGTCTCTTGTGTGTCCAGAAATCTACAGAGGATAGGCCTGTTATGCCTTCTGTTATTCTAATGCTGGGGAGTGACAGTGAATTTTCTAAGCCAAAACAGCCCGGTTACTATGTAAAGAAGGATTCATTTGCAGAATCTTCCAACTCGGGTCGAAGTGAAAAGATCATGACCAACGATATGACTATCACCATATTAGAATCCCGATGA 2001 0.3803 MKLGWNLRTHTETRMTSWKSPEDPSPGDFYLGYLLYNYPEQYLMLGTKKFIRLGPWNGLHFSGIPGQKPNNIFASGHVSTKDEIYSFYTLKNDSVISRMVMNQTTLNYTRYLWMEDQQNWKVLKSIPKDVCDYYGTCGAYGTCIITGSQICECLSGFSPKSPVAWNATDWNQGCVRNKPLNCTNKLKDGFVKVKGLKVPDCTHTWVDQTIGLHECRVKCLNNCSCMAYTYANITGEGSGCVIWFGDLIDIRKFEDDGQDLYIRMDASEFGKEGHDELKNDLIRILTSTIVVSGILFLGYYRYILWRRRRRITEDSEVIDLEGDNGSEDQDDLDLPLLAYSTLVTATNNFSIKNKIGEGGFGPVYKGRLVCGQEIAVKRLSSDSGQGITEFKNEVKLIAKLQHRNLVKLLGCCIEEEERMLVYEYMNNCSLNRFIFDDTKSKLLDWPKRFNIICGIARGLLYLHHDSRLRIIHRDLKPSNILLDDRLNPKISDFGIARIFGLDQTHGNTKRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILMLEIICGKRSRGFYVENDSPNLVTHAWSLWKEGRALELVDKNIEDSCVESEVLRCIHTSLLCVQKSTEDRPVMPSVILMLGSDSEFSKPKQPGYYVKKDSFAESSNSGRSEKIMTNDMTITILESR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1993 666 Pfam S-locus glycoprotein domain 52 161 IPR000858 GO:0048544
Tpr7g1993 666 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Tpr7g1993 666 SMART serkin_6 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1993 666 Gene3D Phosphorylase Kinase; domain 1 324 424 - -
Tpr7g1993 666 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 665 - -
Tpr7g1993 666 CDD PAN_AP_plant 179 263 - -
Tpr7g1993 666 Pfam PAN-like domain 182 250 IPR003609 -
Tpr7g1993 666 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 665 - -
Tpr7g1993 666 Pfam Protein tyrosine and serine/threonine kinase 350 616 IPR001245 GO:0004672|GO:0006468
Tpr7g1993 666 SUPERFAMILY Protein kinase-like (PK-like) 334 620 IPR011009 -
Tpr7g1993 666 CDD STKc_IRAK 355 620 - -
Tpr7g1993 666 SMART ntp_6 185 264 IPR003609 -
Tpr7g1993 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Tpr7g1993 666 ProSiteProfiles PAN/Apple domain profile. 182 265 IPR003609 -
Tpr7g1993 666 ProSiteProfiles Protein kinase domain profile. 349 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1993 666 ProSiteProfiles EGF-like domain profile. 127 163 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1993 Tpr-Chr7 24456065 24459674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1993 279 637 Receptor kinase-like Gene Family AT4G23230 54.444 6.62e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1993 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1993 7 24456065 24459674 Tpr7g1993 7 24456065 24459674 ECH