Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1989 ATGCCTGAGGCACCTAGAGATTACAACCTTGTTGAACAGAACAAAAAAATCCTTGACTTCATTGAGGATGTTACCTCAAACGCAGACCAAGTTCAACAAAAAGTCCTCTCTGAAATCCTCTCTCGCAATGCAAATGTTGAGTATCTTAAAAGATATGGTCTAAATGGTCACACAGACCGTGATACCTTCAAAAAACTTTTGCCTGTTATTTCCTATGAAGATATTCAACCTGATATTGACCGCATCTCCAATGGTGATACCTCTCCAATCCTATGCTCCAAACCCATTTCTGAGTTTCTCACTAGCTCAGGAACATCTGGAGGTGAGAGAAAGTTGATGCCAACAATTGAAGAAGAGTTAGGGAGAAGAAGTTTGTTGTATAGCTTATTGATGCCAGTGATGAGTGAGTTTGTTCCTGGATTAGAAAAAGGGAAAGGAATGTACCTAATGTTTATAAAATCTGAGGCTAAAACACCTGGTGGAATTGTAGCTAGACCAGTTTTAACTAGCTATTACAAAAGTTCTTATTTTAGAGACAGACCTTATGACCCTTACACAAATTACACAAGCCCAAATGAAACTGTACTCTGTCCTGATTCATACCAAAGTATGTATTCACAGTTACTCTGTGGTCTTTGTCAAAACAAAGAAGTTTTAAGGGTTGGTGCTGTTTTTGCCTCTGGTTTTATAAGGGCTATTAGGTTCCTTGAGAAACATTGGACACTTCTTTGTAATGATATTAGAACTGGAACTGTTAATCCTTTAATTACTGACATAACAGTAAGAGATTCTGTTATGAAGATCCTTAAACCTGATCCTAAACTTGCTGATTTTATTGAAACTGAGTGTAGTAAAAGTTCTTGGCAAGGTATAATTACTAGGTTGTGGCCAAATACTAAGTATGTTGATGTTATTGTGACAGGAACAATGTCACAGTATATTCCTATTTTGGATCATTATAGCAATGGTTTACCACTTGTTTGCACTATGTATGCTTCAAGTGAGTGTTACTTTGGTGTTAATTTGAACCCTCTTTGTCAACCTAGTGAAGTGTCTTATACACTTATTCCTACTATGTGTTACTTTGAGTTTTTGCCTGTTAATAGAAGTAATGGTGTCACTGATTCTCTTCACACACCTAGATCTCTTAATGAGAAAGAGCAGAAAGAGTTGGTTGAACTTGTTGATGTCAAACTTGGTCAAGAATATGAACTTGTTGTCACTACTTATGCTGGACTATACCGTTATCGAGTTGGTGATGTGCTGAAAGTAGCTGGATTCAAGAACAAAGCACCACAATTCAACTTCATATGCAGGAAGAATGTTGTATTGAGCATTGATTCTGACAAAACTGATGAAGTCGAGCTTCAAAATGCAATGTCGAATGCTGTGACACATTTAGTGCCATTCGATGCAACTGTGTCGGAATACACTAGCTATGCAGACACAACATCAATCCCTGGACACTATGTCCTATACTGGGAACTCACACTGAACAAATCAACACAAATTCCACCTTGTGTTTTTGAAGATTGCTGCTTAACAATCGAAGAATCGCTCAACAGTGTTTATCGACAGGGCCGTGTCTCAGACAAATCAATTGGTCCACTTGAGATCAAGATTGTTGAACAGGGTACTTTTGATAAGCTAATGGACTATGCCATTAGTTTAGGTGCTTCAATCAATCAGTATAAGACACCAAGGTGTGTGAAGTTTGCACCTGTTGTTGAACTCTTGAACTCAAGGGTAATGTCAAGCTACTTTAGTCCTAAATGTCCAAAATGGGTTCCTGGTCACAAACAATGGATCAATCAGAATTGA 1821 0.3789 MPEAPRDYNLVEQNKKILDFIEDVTSNADQVQQKVLSEILSRNANVEYLKRYGLNGHTDRDTFKKLLPVISYEDIQPDIDRISNGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSEFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCNDIRTGTVNPLITDITVRDSVMKILKPDPKLADFIETECSKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFGVNLNPLCQPSEVSYTLIPTMCYFEFLPVNRSNGVTDSLHTPRSLNEKEQKELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLKVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAMSNAVTHLVPFDATVSEYTSYADTTSIPGHYVLYWELTLNKSTQIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVMSSYFSPKCPKWVPGHKQWINQN* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1989 606 Pfam GH3 auxin-responsive promoter 21 571 IPR004993 -
Tpr7g1989 606 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 603 IPR004993 -
Tpr7g1989 606 PANTHER BNAC03G14570D PROTEIN 7 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1989 Tpr-Chr7 24325525 24328352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1989 9 589 EF-hand Containing Proteins AT1G23160 49.322 0.0 585