Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1419 ATGGATGATGATGTGCTGAATATGCCGAATTGGGGTTACTATGAACCGTTCAAAGCGGGGAATCTCGGTCTAAACCTCATGCCTGGTATGAATGATCGTGAAACGAAACCATTTTTTCCTCCTGGTCGTGATCCAGCTATGTTAGTTGGTGCAAATGGAACTTTTCACCCTCGAGATGATGTTGCTGCTGTTGAGTCTTCGAATCCATTGAACTATGGAAGAGATAATTGGATCAACCAGAGACCTAGGTTTTATAATATGCAGGTCAACAATCCAAATTATGCTGTTCCTCCTGAAACATCGCAAGGACCCTCCTTTCCGTTTATTCCATCCGCTGTTACTGATCCACCAAGAAATGAGAATGTGGATGAAATTGAAGAATTAGCTGTTAAGAAGGAAGGTGGCAAGGCGAAGAAAAGGAAATCTAAGGCTGCTCCTACTACTCCAAAAGCTAAGAAACCCAGGAAGCAGAAGGATAATAGCAATGTTTCAGGTCAAGGTGTGAAACCACCGAAGAAGACTGTGGCACTTGAAATCAATGGAATTGAAATGGACATTTCTGGTCTACCTGTTCCAGTTTGTTCCTGCACCGGGAATCCTCAGCAGTGTTATCGATGGGGCTGTGGAGGTTGGCAATCTGCTTGTTGTACCACAAATGTGTCAATTTATCCTTTGCCGATGAGCGTCAAAAGGCGTGGTGCAAGGATAGCTGGGAGGAAAATGAGCCAAGGAGCATTTAAAAAGGTTTTGGAAAAGCTTGCGGCTCAAGGTTACAATTTTGCTAACGCTATTGATCTGAAGACTCACTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGATAG 849 0.4382 MDDDVLNMPNWGYYEPFKAGNLGLNLMPGMNDRETKPFFPPGRDPAMLVGANGTFHPRDDVAAVESSNPLNYGRDNWINQRPRFYNMQVNNPNYAVPPETSQGPSFPFIPSAVTDPPRNENVDEIEELAVKKEGGKAKKRKSKAAPTTPKAKKPRKQKDNSNVSGQGVKPPKKTVALEINGIEMDISGLPVPVCSCTGNPQQCYRWGCGGWQSACCTTNVSIYPLPMSVKRRGARIAGRKMSQGAFKKVLEKLAAQGYNFANAIDLKTHWARHGTNKFVTIR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1419 282 SMART GAGA_bind_2 1 282 IPR010409 -
Tpr3g1419 282 PANTHER - 1 282 IPR010409 -
Tpr3g1419 282 PANTHER BNAA06G09500D PROTEIN 1 282 - -
Tpr3g1419 282 MobiDBLite consensus disorder prediction 94 108 - -
Tpr3g1419 282 MobiDBLite consensus disorder prediction 94 172 - -
Tpr3g1419 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Tpr3g1419 282 MobiDBLite consensus disorder prediction 119 134 - -
Tpr3g1419 282 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1419 Tpr-Chr3 12584900 12587051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1419 1 282 BBR or BPC Transcription factor family AT2G01930 56.376 9.63e-103 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Tpr3g1419 GAGA_bind 5.2e-96 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1419 3 12584900 12587051 Tpr3g1419 3 12584900 12587051 ECH