Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1418 ATGAGGGTCTGGAAACAAGCAACAGGAGTTATCAAAGACAAGAACAGCATTTGGGCTGCAAAATTTTCAAGAAAAGGTCCATGGCGTAATCCTGATCTTGAAACTGTTATAATAAAAGCTACAAGCCACGACGAAAACCGCATCGATTGTAAGAATGTTCAAAGAGTTTTTAAATGGCTAAGAACATCTCCTTTGTATTTGAAACCTTTGGTTTGGGCTTTGTCTATAAGAATGCAAAAAACTAAGAGTTGGGTTGTGGCTCTTAAAGGATTAATGCTCATTCATGGAGTTTTCTGCATTGGTATCCCTGTGGTACAAAAAATGGGTAGGTTACCATTTGATTTATCAAATTTCAATGATGGTTATTTGAATCCTTCAAAAGCTTATGGTGTTAATGCTTTTGTCCGTTCTTATTTCGCTTATTTGGATAAAAGATCGGTTTTTGTTTCATCCGAGGTTAAGAATTTGAAGAAGAATAATAATAATAATAAGGAGGGGGAAGTTGAAGAGACATTGATGGAAGAGCTAGAGAAGTTGCAAAATTTGCAAGAAATGATTGATATGCTTTTGCAAATCAAACCAAGGAATGTGAATATGAATGTTGGTCTTATTCTTGAAGCAATGGATTGTATCATAGTTGAGATTTTTGATGTTTATAGTAAATTTTGTAACAAGATTGCAAGGGTGTTGATGAGGATTTATGATGTCGGTGCGAAAACGGAAGCTTGTATTATGCTAAAGATTTTGCAAAAAGCAGTTATTCAAGGGGATGAATTGGCTTGTTACATTGAGTTTTGTAGGGATATTGGTGTCCTTAATGCTTCTCAATGTCCTAAGATTGAAAGAATTTCTGATGAAGATATTCAAGATCTTGAGAAGGTAATTAAGGGTGCTTATTATGATAAGAAAAGCTTGGAGGGTATTAATGATTGTGGTGGTGAAAAGGAGAATCAAGACAAGGCTATTGTGGTAAGAGATTTCTTGCAGCGCAAGGAATTATCACAAAATGGTTTAACAACTGTGATTACTCATCAATGGGAGGTGTTTTTTGATGACATAATGGTTAATGATGTCAAAGGAAATAGTGTCATCAATGGTGACAAGGGTAGTATTGTAATAACAACTAACCCTTTTGAGGAATCATATAGCATTGTACCTTATTGTCACGTTAACATTAATCAATCTCTTCCAGACCTAATTAGTTTGTAG 1209 0.3474 MRVWKQATGVIKDKNSIWAAKFSRKGPWRNPDLETVIIKATSHDENRIDCKNVQRVFKWLRTSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCIGIPVVQKMGRLPFDLSNFNDGYLNPSKAYGVNAFVRSYFAYLDKRSVFVSSEVKNLKKNNNNNKEGEVEETLMEELEKLQNLQEMIDMLLQIKPRNVNMNVGLILEAMDCIIVEIFDVYSKFCNKIARVLMRIYDVGAKTEACIMLKILQKAVIQGDELACYIEFCRDIGVLNASQCPKIERISDEDIQDLEKVIKGAYYDKKSLEGINDCGGEKENQDKAIVVRDFLQRKELSQNGLTTVITHQWEVFFDDIMVNDVKGNSVINGDKGSIVITTNPFEESYSIVPYCHVNINQSLPDLISL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1418 402 Coils Coil 165 192 - -
Tpr3g1418 402 CDD ANTH_N_AP180_plant 33 148 - -
Tpr3g1418 402 Gene3D - 4 152 IPR008942 -
Tpr3g1418 402 SUPERFAMILY GAT-like domain 174 297 - -
Tpr3g1418 402 PANTHER OS08G0467300 PROTEIN 1 373 - -
Tpr3g1418 402 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Tpr3g1418 402 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Tpr3g1418 402 Pfam ANTH domain 32 296 IPR011417 GO:0005543
Tpr3g1418 402 Gene3D ANTH domain 157 312 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tpr3g1418 402 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 373 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1418 Tpr-Chr3 12581739 12583373 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1418 3 12581739 12583373 Tpr3g1418 3 12581739 12583373 ECH