Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1402 ATGTGGCCTACATTAGTTGCTAATAAGATACTAAAGAAGAGATTAGGAAGCACTAATTTTATAGCAGATTATCCTAGTTATGATGAACCTTTGTTGGGTTTTGAAGACATTGATCATAGTCTTGAAACGATTCCTAATCATCACAAGGAAAACCACAAATACAAGATTTTTGTTAGTACATGGAACATAGGTGGAATTGCACCAGAAGAAGATCTAAATATTGATGATTTGTTGGAGACAAACAATAACTTATGTGACATCTATGTACTTGGGTTTCAAGAAATAGTACCCCTAAAAGCTTCAAATGTATTAGGATCAGAAAACAATGAGATTTCCAAGAAATGGAATTCAATAATCAGAAAAGCTTTGAACAAGGATGAGAAAGATAAAGTTCATAGTGAATCCTCACATGATGATTTCCAATGTATAATTAGCAAGCAAATGGTTGGAATATTCATATCTGTGTGGATAAGAAGAGATATTCGTCCATTCATTCAACATCCAAATGTATCATGCATAGGTTGTGGCATATTGGGATGTTTAGGAAACAAGGGGTCTGTATCAGTGAGATTTCAATTGCATGAAACAAGCTTTTGCTTTGTGTGTAGTCATCTAGCTTCTGGAGGCAAAGAAGGGGATGAGAAGTGTAGAAATTCAAATGTTGCTGAAATTTTTTCTAGGACTAGCTTTCCTAGAGGTCCTTTGTTTAATTTGCCAAGAACTATTCTAGATCATGATCATGTAGTATTGCTTGGAGATTTAAATTATAGGATTTCTCTACCAGAAGAAACGACACGGTTACTTGTTGAGAAAAGGGAGTGGGATTCCTTATTAGAAAATGATCAGCTAATGATGGAGCTAATGAATGGGAACAATTTAAGAGGATGGCATGAAGGACCAATCAAATTTGCACCTACCTACAAATATTGTCCAAATTCAGACATGTACTATGGATGCTGTTGTCATGGAAAAAAGATTGAAAAGAGGCGAGCACCGGCATGGTGTGATCGAATAGTATGGTATGGAAAGGGTTTGAAGCAACTTGAGTACACAAGGAGTGAATCAAGACTATCAGATCATAGGCCTGTTAAGGCAATTTTTACTGCAGTAATAAAGGTTTCATCAGAATTCAAAAGCATACAAAGATTATCTCTATCAGAAAGATTTGAGCAAATTAAAACTCCTTTTGAAGTTTCTACTACTGATGAAATTATATGTAGAAAACAATCAAGTTTCCATTTGTAA 1245 0.3478 MWPTLVANKILKKRLGSTNFIADYPSYDEPLLGFEDIDHSLETIPNHHKENHKYKIFVSTWNIGGIAPEEDLNIDDLLETNNNLCDIYVLGFQEIVPLKASNVLGSENNEISKKWNSIIRKALNKDEKDKVHSESSHDDFQCIISKQMVGIFISVWIRRDIRPFIQHPNVSCIGCGILGCLGNKGSVSVRFQLHETSFCFVCSHLASGGKEGDEKCRNSNVAEIFSRTSFPRGPLFNLPRTILDHDHVVLLGDLNYRISLPEETTRLLVEKREWDSLLENDQLMMELMNGNNLRGWHEGPIKFAPTYKYCPNSDMYYGCCCHGKKIEKRRAPAWCDRIVWYGKGLKQLEYTRSESRLSDHRPVKAIFTAVIKVSSEFKSIQRLSLSERFEQIKTPFEVSTTDEIICRKQSSFHL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1402 414 Gene3D Endonuclease/exonuclease/phosphatase 35 394 IPR036691 -
Tpr3g1402 414 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 391 - -
Tpr3g1402 414 Pfam Endonuclease/Exonuclease/phosphatase family 60 360 IPR005135 GO:0003824
Tpr3g1402 414 SUPERFAMILY DNase I-like 51 372 IPR036691 -
Tpr3g1402 414 SMART i5p_5 52 375 IPR000300 GO:0016791|GO:0046856
Tpr3g1402 414 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 391 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1402 Tpr-Chr3 12495789 12500036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1402 55 411 Acyl Lipid Metabolism Gene Families AT1G65580 26.794 1.02e-35 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1402 3 12495789 12500036 Tpr3g1402 3 12495789 12500036 ECH