Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1395 ATGGCTTCTTCTCAAATGGGGTTTCTCTTCTTTTGTTCTATGCTTCTTCTTTTCACTTCAGCTTCATCTAGAAATTTACCTATTATAGCTTTTGATGAAGGGTGCACACCCTTGTTTGGTGATAACAACGTATTTGTTCATAAAGATGGCAAATCGGTTCATCTTTCATTAGATGAAAGAACAGGTTCTGGATTTGTGTCTCATGATCTTTATCTTCATGGGTATTTCAGTGCTTCCATTAAGTTACCTGCTGATTACACTGCTGGAGTTGTGGTTGCTTTTTATATGTCAAATGGTGACATGTATGAGAAGAACCATGATGAAATAGACTTTGAGTTTTTGGGAAACATTAGAGGTAAAGACTGGAGAATTCAGACCAATGTTTATGGCAATGGAAGTACCAATATTGGCAGAGAGGAAAGATATGGTCTCTGGTTTGATCCTGCTGAGGATTTTCATCAGTATAGTATTCTCTGGACAGATTCTCATATCATATTTTATGTCGATAACATTCCCATTAGAGAAGTTACGCGAACAAAATCTATGGGAGGAGATTTCCCCTCTAAGCCTATGACACTCTACGCGACAATATGGGATGCATCAGATTGGGCTACCAATGGGGGAAAGTACAGAGTAAATTACAAGTATGCACCATACGTTGCCAAATTCTCCGACCTTGTCCTACATGGTTGTGCAGTCGATCCGATCGAGCACGTAGCCAACTGTGACACTGCTCAAAGTTCCGAAGCTATTCCTTCTGGTGTTACACCAGTACAAAGAATCAAAATGGAGAATTTCAGAAAGAAGCACATGCAATACTCCTACTGTTATGACAAAATCAGATACACCAAAGCCCCTCCATCAGAGTGCGTGATCAATCCACAAGAAGCCGAAAGACTAAGAAAATTCGACCCTGTCACATTCGGTAGTGGCAGGCATCGTCATGGAAAACGACACCATCACAGCAAAGGAAACCAAGCTGAAGCTGTTTCATTTTAA 999 0.4044 MASSQMGFLFFCSMLLLFTSASSRNLPIIAFDEGCTPLFGDNNVFVHKDGKSVHLSLDERTGSGFVSHDLYLHGYFSASIKLPADYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNIGREERYGLWFDPAEDFHQYSILWTDSHIIFYVDNIPIREVTRTKSMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAKFSDLVLHGCAVDPIEHVANCDTAQSSEAIPSGVTPVQRIKMENFRKKHMQYSYCYDKIRYTKAPPSECVINPQEAERLRKFDPVTFGSGRHRHGKRHHHSKGNQAEAVSF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1395 332 CDD GH16_XET 29 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Tpr3g1395 332 Gene3D - 18 290 - -
Tpr3g1395 332 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 294 IPR013320 -
Tpr3g1395 332 PIRSF EndGlu_transf 1 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Tpr3g1395 332 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 7 311 IPR044791 GO:0004553
Tpr3g1395 332 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 253 290 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Tpr3g1395 332 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 7 311 - -
Tpr3g1395 332 Pfam Glycosyl hydrolases family 16 38 215 IPR000757 GO:0004553|GO:0005975
Tpr3g1395 332 MobiDBLite consensus disorder prediction 308 332 - -
Tpr3g1395 332 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 21 223 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1395 Tpr-Chr3 12437465 12440356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1395 6 331 Glycoside Hydrolase AT1G14720 68.072 1.28e-169 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1395 3 12437465 12440356 Tpr3g1395 3 12437465 12440356 ECH