Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1392 ATGATGACTCCAAACTTGAACTTGGAACCTGAAAATCAGTCAGAAGCACCTAATGATCATCTAGATTCTTCTATGACCCTTGATTTGACACTCAATTTCAGTTCTAGTGACAGCGAGTTAAAGGGTTCAAGTGATGCTAGCAGCGAAGTAGGAGCTGGCGAAGATCAAGCTGCGCCTAATATAACTCCAAGGGTTTTCTCTTGTAATTATTGCAAGAGGAAGTTCTTTAGCTCGCAAGCGTTAGGAGGTCATCAGAATGCTCACAAAAGGGAGAGAACGATGGCTAAACGCGCGATGAGAATGGGTATGTTCACTGAGCGGTATACAAGCCTAGCATCTCTTCCTCTTCATGGTTCACCTTTTCGGTCCCTTGGTGTTGAAGCTCATTCTGCAATGCATCAAAGAAGTCATGTGCAACCATCATCATCAATGAGGGCTCCTGATATGAGAGCTTCTGCAAAATTTGATAGGAACCATTTCGGATCGTTGGTTTACGTGGAAGACGATGATGTAGGATTCTTTTGGCCCGGAAGTTTCAGACAGGTGGATCAGGGAGGTGGTATTAATATAGGGCATCCTCAAACTTCAAATTCTAGTTTTACTCCGATGGAACCTCCCCGGCCACAAGCATCTGCATCTCCTGATCTCACATTAAAGTTATAA 663 0.4389 MMTPNLNLEPENQSEAPNDHLDSSMTLDLTLNFSSSDSELKGSSDASSEVGAGEDQAAPNITPRVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGVEAHSAMHQRSHVQPSSSMRAPDMRASAKFDRNHFGSLVYVEDDDVGFFWPGSFRQVDQGGGINIGHPQTSNSSFTPMEPPRPQASASPDLTLKL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1392 220 MobiDBLite consensus disorder prediction 1 58 - -
Tpr3g1392 220 PANTHER ZINC FINGER PROTEIN JAGGED 12 220 IPR045320 GO:0003700
Tpr3g1392 220 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Tpr3g1392 220 Gene3D Classic Zinc Finger 56 113 - -
Tpr3g1392 220 MobiDBLite consensus disorder prediction 198 220 - -
Tpr3g1392 220 PANTHER ZINC FINGER PROTEIN 3-RELATED 12 220 - -
Tpr3g1392 220 SUPERFAMILY beta-beta-alpha zinc fingers 63 94 IPR036236 -
Tpr3g1392 220 MobiDBLite consensus disorder prediction 1 45 - -
Tpr3g1392 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1392 Tpr-Chr3 12397076 12399635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1392 59 220 C2H2 Transcription Factor Family AT1G66140 44.624 5.44e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g1392 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1392 3 12397076 12399635 Tpr3g1392 3 12397076 12399635 ECH