Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1391 ATGGCTTTGTTTATACATGATAATCACTTTCACATAATCTCCTTGTTCTTGTTCTTGATTACTTTGCCAACATCAATTTCCCAACAACAACTTAACAAATATGAAGAGTGTCTCAAACCATACACATGTGGTGGTGAATTATCTGTATACTATCCATTTTGGGGACAAAACAGACCAAATTATTGTGGCAGCTACACCAATCAATTCAACCTCAAATGTGATTCTCAAAACACATCTATTCAAATTGCTTCTCAAAATTTCCAAGTCTTACACGTTGATCAACTCGGTTACACCATCAAAATGTTTCGAAAAGGCCTTGTTTATGATAATTGTTCTTCGGCTTTAACCAACACTTCTTTAGACTTGAGGCACTTTCAATATATGCCTAATGTGAGAAACATCACTATTTTATATAACTGTCCTAACGATATCGAGTTTCTAAATGGCACGAAAGCAAGGGTGAACTCGTTTTCGTGCAAGGAAGATAAGAAAAAGCGCGCTTTCTATGCAGATTCTGCATTAGCAGAAGGTATAAAATGTGACGGAGTTCGACTTGAAGTTCAAGTAACACAGGAAGTGGAGATTGGTGGTGGAATTGAAGAGTTGAACAAAGCTTTGAGTAATGGATTTGATGTTAAATATTTTTCAAATTCTCAAGAATGCTTAAAATGTGTTTTCAGTAATGGAACTTGTGGAGGGAATGATAGGTCTCAATTTTCCTGCTATTGTCCTGATGGAACTGAAGGTTTAGATTGTTCTCATCTCCACGACAATGGATGGAATTGGAAAAAGAAGTTTGGTGTAGGGGTTGCTGTTGCTGCTGTGTCCAGTGCAATTTTTGTAGGCATTGCATTCTACATATATTATGGTAGAAAGAAGAAAAAGAATATTCATGCAGTATCATCTACTAAACTATCTCATAGTATTTCTAGTTCTAGTTCAGAAAATTCTGAGAATGGAAGTAGATATCATGGAGTCCACTTCTTCACCTACAGTGAACTTGAAAAAGCCACAAACAACTTTGATTCTACCACAGCACTAGGAGATGGAGGCTTTGGCACAGTCTATTTTGGAAAACTGCGAGATGGACGTTTCGTTGCGGTGAAACGCATGAACGAAAACAACTATAGGAGAGTTGAGCAATTTGTGAATGAAGTTGAGATCTTAACCGGCTTACACCATCAAAATCTTGTGTCACTATATGGATGCACTTCACGCCACAGTCGCGAACTTCTACTTGTATATGAATATGTTCCTAATGGAACTGTTGCTGATCACCTTCATGGTAAGAAAGCAAAACCCGGCATGCTACCTTGGCATATCAGAATGAACATTGCAATAGAAACTGCTAGTGCATTGGTATATCTTCACGCCACCGACATCATCCATAGAGATGTGAAAACAACCAACATTCTCCTCGACAATCATTTTAGTGTCAAAGTAGGAGATTTTGGACTTTCGCGTCTATTTCCAATCCATGTCACGCACATTTCAACTGCTCCACAAGGGACTCCTGGTTACGTGGATCCGGAATATCATTTGTACTATCAACTTACTGATAAAAGCGATGTATTTAGCTTCGGAGTTGTGTTGATTGAGCTGATATCGTCTATGCCTGCTGTCGATATCTTGAGGAAAAGGCAAGATATCAATTTGTCTAACATGGCTATTAAGAAGATTCAAAATGGAACATTGCATGAGCTTGTTGACCCTACACTTGGTTTTGAATCAGATTTCAAGATAAGGAAAATGATCAATGCTATGGCAGAGTTAGCATTTCAGTGTTTGCAGAATTCTAAAGATGTTAGACCTTCTATGGTTGAAGTGTTGGAAAGGCTTAAGGATATTCAGAGTGATGGAACATATAAATCTAAACCTGAGGTGTTGGATATCTCAGTAGATGATGATGATATTACTTTGATAAAAAATGAACCACCACCATCATCACCAGATTCAAATACCATTATTTTCCCTGATAGAACATAG 1986 0.3766 MALFIHDNHFHIISLFLFLITLPTSISQQQLNKYEECLKPYTCGGELSVYYPFWGQNRPNYCGSYTNQFNLKCDSQNTSIQIASQNFQVLHVDQLGYTIKMFRKGLVYDNCSSALTNTSLDLRHFQYMPNVRNITILYNCPNDIEFLNGTKARVNSFSCKEDKKKRAFYADSALAEGIKCDGVRLEVQVTQEVEIGGGIEELNKALSNGFDVKYFSNSQECLKCVFSNGTCGGNDRSQFSCYCPDGTEGLDCSHLHDNGWNWKKKFGVGVAVAAVSSAIFVGIAFYIYYGRKKKKNIHAVSSTKLSHSISSSSSENSENGSRYHGVHFFTYSELEKATNNFDSTTALGDGGFGTVYFGKLRDGRFVAVKRMNENNYRRVEQFVNEVEILTGLHHQNLVSLYGCTSRHSRELLLVYEYVPNGTVADHLHGKKAKPGMLPWHIRMNIAIETASALVYLHATDIIHRDVKTTNILLDNHFSVKVGDFGLSRLFPIHVTHISTAPQGTPGYVDPEYHLYYQLTDKSDVFSFGVVLIELISSMPAVDILRKRQDINLSNMAIKKIQNGTLHELVDPTLGFESDFKIRKMINAMAELAFQCLQNSKDVRPSMVEVLERLKDIQSDGTYKSKPEVLDISVDDDDITLIKNEPPPSSPDSNTIIFPDRT* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1391 661 Gene3D Transferase(Phosphotransferase) domain 1 418 627 - -
Tpr3g1391 661 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Tpr3g1391 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 13 654 - -
Tpr3g1391 661 Pfam Wall-associated receptor kinase galacturonan-binding 39 101 IPR025287 GO:0030247
Tpr3g1391 661 MobiDBLite consensus disorder prediction 645 661 - -
Tpr3g1391 661 Gene3D Phosphorylase Kinase; domain 1 309 417 - -
Tpr3g1391 661 ProSitePatterns EGF-like domain signature 1. 241 252 IPR000742 -
Tpr3g1391 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Tpr3g1391 661 ProSiteProfiles EGF-like domain profile. 217 253 IPR000742 -
Tpr3g1391 661 SUPERFAMILY Protein kinase-like (PK-like) 314 613 IPR011009 -
Tpr3g1391 661 SMART serkin_6 341 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1391 661 Pfam Wall-associated receptor kinase C-terminal 179 246 IPR032872 -
Tpr3g1391 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 654 IPR044652 -
Tpr3g1391 661 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1391 661 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1391 661 CDD STKc_IRAK 347 616 - -
Tpr3g1391 661 MobiDBLite consensus disorder prediction 641 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1391 Tpr-Chr3 12383819 12386992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1391 39 654 Receptor kinase-like Gene Family AT1G25390 43.082 5.57e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr3g1391 Pkinase 9.3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1391 3 12383819 12386992 Tpr3g1391 3 12383819 12386992 ECH