Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0314 ATGGCCGACGCTCTGTCGTCTATTCCGGCAGCCGTTCTTCGTAACCTTGCTGATAAGCTCTATGAGAAACGTAAAAATGCTGCTCTTGAGATTGAGAATATAGTGAAGCAATTAACTGCTAATGGAGATCATGATAAAATTAAGGCTGTTATCAATTTGTTGACTAATGAATTTATTAATTCACCACAAGCTAATCATCGGAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGGTTGACTTCTGAAGCATCTCAGCATCTTGAGAGTATTGTGCTCCCTGTGCTAGAGTCTTTCTCTGATCAAGAAAGCAGAGTTCGTTATTATGCCTGTGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGACTTTATTCTATACTTCAACAACATTTTTGATGCCTTATGCAAGCTTTCCGCGGACTCTGATGGAAATGTACAAAGTGCTGCTCACCTATTAGATCGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATCGAAGAATTTATACCACTGTTGAAGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTCCTTCCTGATTTTCTTGATGGATTGTTTAACATGTTAAGTGATTCGAGTCATGAAATACGTCAACAGGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAAATTAAGAATTCACCATCTGTAGATTATGGTCGAATGGCTCAAATACTGGTACAGAGGGCAGGTTCTCCAGATGAATTTACGAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCAGACATTCTTGGAGCCATTTTGCCCTGTATATCAGATAAAGAAGAGAAAATCAGAGTTGTTGCTCGTGAAACCAATGACGAGCTACGTGCTATTAAGGCTGATCCAGCTGAAGCATTTGATGTTGGAGCTATTCTCTCCATTGCCAGGAGGCAAATATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTGTAAATGAATATCGCACCGAGGTTTTGCAATATCTGAACGACATATTCGACACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTAGTTCTTCAAGTTCATGCGTGCATCGCGAAGGATCCTCAGCACTTTCGTCAGCTTGTTGTTTTCCTGATGCACAATTTCCGGACAGACAATTCACTTTTAGAGAAGCGTGGTGCTTTAATAATCCGCCGGCTCTGTGTGCTTTTGGATGCTGAGAGAGTCTATCGTGAACTTTCTACAATACTAGAAGGGGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAACTATCTGAGATTAGAGTTCTTTTGAAGCAATCATTGGTAAATCCTGCCGGAAAGGATTTATTTGTTTCTTTGTATGCCTCATGGTGTCATTCTCCAATGGCGATTATCAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGCGAGTACTGTGATTCAATCTCTGGTAGAGGAGGATATTAATGTCAAATTTTTAGTACAACTGGACAAATTGATTCGTTTGCTAGAAACTCCAGTCTTCGCTTATCTAAGATTGCAGCTTCTGGAGCCTGGAAGATATACATGGTTATTTAAAGCACTGTATGGCCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATACTAAAAACTCGTTTGAAAGCCGTGCCATCGTATTCTTTCAATGGTGAACAATTGAAGAAAACATCCTCTGGGAACCCCTATCAATTTCTCCAACACATGTCTGGTGGATCTCACACAGCAGAGGATGGCGACGTAGCTGTGGACAGTGGGAACTCACACAATGGAATCAATTTTGTTGCAAGGCTAAATCAGTTTCAGCAAATGCAGCAACAGCATCGCGAACATTTTAGAGCACAGGCACAGACACGCAAAAATTCCACCTCAGTAGCAAAGGAGGAGGAGGTACAAAGGCAAGAAGAAGAAACAAAGAGACCTCATTTGAATGAGCTTAATGCTCCAAGATCATTCAAGAGAGCTAGCTAA 2163 0.4129 MADALSSIPAAVLRNLADKLYEKRKNAALEIENIVKQLTANGDHDKIKAVINLLTNEFINSPQANHRKGGLIGLAAATVGLTSEASQHLESIVLPVLESFSDQESRVRYYACEALYNIAKVVRGDFILYFNNIFDALCKLSADSDGNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLKERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAQILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNDELRAIKADPAEAFDVGAILSIARRQISSEWEATRIEALHWISTLVNEYRTEVLQYLNDIFDTLLKALSDPSDEVVLLVLQVHACIAKDPQHFRQLVVFLMHNFRTDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRVLLKQSLVNPAGKDLFVSLYASWCHSPMAIISLCFLAQTYQHASTVIQSLVEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYQFLQHMSGGSHTAEDGDVAVDSGNSHNGINFVARLNQFQQMQQQHREHFRAQAQTRKNSTSVAKEEEVQRQEEETKRPHLNELNAPRSFKRAS* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0314 720 Coils Coil 17 37 - -
Tpr3g0314 720 MobiDBLite consensus disorder prediction 669 686 - -
Tpr3g0314 720 SUPERFAMILY ARM repeat 3 544 IPR016024 -
Tpr3g0314 720 MobiDBLite consensus disorder prediction 669 720 - -
Tpr3g0314 720 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Tpr3g0314 720 Gene3D - 249 417 IPR011989 -
Tpr3g0314 720 ProSiteProfiles HEAT repeat profile. 93 127 IPR021133 -
Tpr3g0314 720 PANTHER TAX1 BINDING PROTEIN-RELATED 4 694 IPR026825 GO:0006661|GO:0070772
Tpr3g0314 720 PANTHER PROTEIN VAC14 HOMOLOG 4 694 - -
Tpr3g0314 720 Gene3D - 1 248 IPR011989 -
Tpr3g0314 720 MobiDBLite consensus disorder prediction 687 711 - -
Tpr3g0314 720 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0314 Tpr-Chr3 3406805 3416469 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0314 3 3406805 3416469 Tpr3g0314 3 3406805 3416469 ECH