Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0313 ATGTCTTGGGAAGACGAGATCGTCATTCGTGATGTCACCAATGCCGGTCTTGTCGTCAGTGATCGTATTGGCCGTGAAGTTTCTTCTCAGCTCGACCTTGAAGAATCTCTAGAAGCTTCTAGATATGCTAGTCATCCTTATTCTACTCACCCTAGAGAGTGGCCTCCTTTAGTTGAGGTAGCGAATACTTGGGAGTTGCCTCCTGTTCTTATTGAAAGATACAATGCAGCTGGCGGAGAAGGGACTGCTTTTTGTGGAATATTTCCTGAAATACGTAGAGCATGGGCGTCCGTGGATAATTCTTTGTTTCTATGGCGTTTTGATAAGTGGGATGGCCAGTGTCCCGAATATAGTGGGGAGGAACAAGCTATTTGTGCTGTTGGTCTTGCAAAATCAAAGCCTGGTGTTTTCGTTGAAGCTATCCAATATCTTTTAGTCTTAGCAACCCCTGTTGAGTTAATTTTAGTTGGAGTGTGCTGCTCTGGAGGAGCAGATGGCTCAGATCCATTTGCAGAAGTTTCACTACAGCCATTGCCAGATTATACAATACCTTCTGATGGGGTTACGATGACATGTGTAGCATGTACCGATAAGGGCCGCATTTTCCTTGCTGGTCGTGATGGCCACATATATGAGCTTATTTATTCAACTGGCTCAGGATGGCAAAAGCGTTGCAGAAAAGTATGTGTCACTGCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCAAATGTATTCAATTTTGGAACTGTTGACCCTGTTGTTGAAATGGTTTTTGATAACGAGAGACAGATATTATATGCACGGACTGAAGAGATGAAGCTTCAGGTTTATGTTCTTGGACCAATTGGTGACGGGCCATTAAAGAAAGTTGCTGAAGAAAGGAATCTTGTCAATCAGAGAGATGGACATCATGGAGGTAGACAATCAAGTGGTTCAAGAGTATCAAGTCGATCACCGAAGCCATCTATTGTTTGCATCTCACCCTTATCTACACTTGAATCCAAATGGCTACATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTACCTATCCACCTCTCCTTCTAGTGGAAGCCTGAACGGATTCAACACCAACCATCATAAGCCTAGCTGTTTAAAAGTTGTGACAACAAGGCCCGCTCCTCCTTGGGGTGTTAGTGGCGGTCTCACCTTTGGAACCATGGCTCTTGCTGGTAGACCTCAAAATGAGGATCTCTCACTGAAAGTCGAGGCAGCCTATTATTCTGCTGGAACTCTTATCCTTTCTGATGCATCACCTCCAACTATTCCTTCACTCCTTGTTTTAAACAGGGATTCGAGCACACAGTCATCACCATCGGGTAATCTAGGGACAGGTACAAGGAGTTCCCGGGCATTACGGGAATCAGTATCTTCTTTACCAGTTGAAGGACGCATGCTTTCTGTCGCCGATGTTTTACCTTTACCAGATACTTCGGCTACGGTGCAGTCTCTTTATTCAGAAATTGAGTTTGGTGGTTATGAGAGTTCAATGGAATCATGTGAAAGGGCGTCTGGCAAACTGTGGGCAAGGGGAGATCTCTCAACCCAACATATATTGCCAAGGAGGAGGATTGTCATCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTAGACATTTTAAGGCGGCTATTAGAGTCCAATTCTCCGAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCCGGTGAGGCAGCCGCCATGTGTTTAATGCTAGCTGCAAGGATAGTACATTCTGAAAACTTTATCAGCAATGTTATTGCTGAGAAAGCAGCTGAAGCTTTTGAGGATCCAAGACTTGTTGGCATGCCACAACTTGAAGGCAGTAATGCATTATCAAACACAAGAACTGCTGCCGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCGCATGAAGGTCTCTGTTTGTGTTCATCTAGATTACTCTTTCCTCTATGGGAGCTACCTGTAATGGTTATAAAAGGAAGCTTAGGTGATTCAGGCACTTCATTTGAGAATGGGGTAGTTGTATGCAGACTATCCATTGGGGCTATGCAAGTCCTTGAACTCAAACTCCGATCTTTAGAGAGATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGTTTAGGAGATGTAAGTGGTTCCATTCTATATGGTAGTGGTTCTGCATTGGGAGCCGGTGACCGAAGTATGGTAAGAAACTTGTTTGGTGCATATTCGAGAAATATGGAGTCCAATGGTGGTGGAACTGCAAATAAAAGGCAAAGATTGCCGTATAGTCCTGCAGAATTAGCTGCCATGGAGGTGAGGGCAATGGAGTGCATTAGACAGTTGCTCCTTAGATCTGGCGAAGCTCTATTTTTGCTTCAACTTCTCTCACAGCATCATGTCACTCGTTTGATTCAGGGATTTGATGCTAACCTTCAACAGGCCTTAGTTCAGTTAACATTTCAACAATTAGTTTGTTCTGATGAGGGCGACCGTCTTGCTACAAGGCTTATATCTGCTCTGATGGAGTATTACACTGGTACAGATGGCAGGGGAACTGTAGATGACATTAGTAAGAGATTAAGAGAGGGTTGTCCGAGCTACTATAAGGAGTCTGATTACAAATTCTTCTTAGCCGTGGAAGCCCTGGAGAGAGCTGCTGTAACTATTGATGATGAGGAAAAGGAGACTCTTGCACGGGAGGCATTGAATTCCTTAAGCAAAGTTCCAGAGTCTGCAGACTTACGTACTGTTTGCAAACGTTTTGAGGATTTAAGGTTTTATGAAGCTGTAGTGTGCTTACCTCTTCAGAAGGCACAGGCTATCGACCCTGCAGGTGATGCTTATAATGATGAAATTGATGCAACAGTCAGAGAACAAGCACTTGCTCAGCGTGAACAGTGTTATGAGATAATTATCAGTGCTTTGCGGTCTCTTAAAGGTGACACCTTGCGGAAGGAATTTGGCTCTCCCATTAGATCTGCTTCCCAATCTGCACTTGATCCAGCCTCTCGGAAAACGTATATAAGCCAAATCGTTCAGCTGGGTGTCCAATCACCTGACAGAATTTTCCATGAGTATCTTTACCAAGCTATGATCGATTTAGGTCTTGAGAATGAATTGTTAGAGTATGGAGGCCCTGACCTGTTGTCATTTTTACAAAGTGCTGGTCGTAAACCCATACATGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAATGGGCCAATCGGGAGCACCTATGTCGCCTAATCAAGTCAAGTACTATGAACTTTTGGCACGTTATTATGTCTTGAAGCGGCAACATATGCTTGCTGCTCATGCATTGCTAAGATTAGCTGGAAGGCCTTCTACTGATGGAATACCTACTCTTGAGCAGAGGTGTCAATACCTAAGCAATGGAGTTTTACAAGCAAAGAATGCAAATAATAGTGATGGGTTGGTTGGTTCTACTCAGAGTTCCAGTGACACTGGATTACTAGATATGCTTGAAGGGAAGCTTGCTGTTCTCCGGTTTCAGATAAAAATCAAAGAGGAACTAGAGGCTATGGCTTCCAGTTCTGAGGTTTTACACAGCACATCCAATTCTGTTGAAAATGGTTTAGTCCCTGAAACCAGTTCAACTGTTGATGCCAATTTTGCAAATGCAGCACGAGAGAAAGCCAACGAGCTATCATCAGATTTGAAGAGCATAACGCAATTATATAATGAATATGCTGTTCCCTTTAAGCTCTGGGAGACATGCCTGGAGATGCTGTACTTTGCCAATTATTCTGCTGATAGTGACCGTAGCATTGTCAGAGAGACATGGGCTAGACTTTTAGATCAAGCTATTTCAAGAGGCGGCATTGCTGAAGCTTGCTCAGTGCTAAAGAGAGTTGGGCCCCGTCTCTATCCGGGTGATGGAACTGTTTTACAGCTTGACATTATTTGTCTTCACCTGGAGAAGGCTGGACTGGAGAGGTTAAATTCCGGGGTTGAATCTGTTGGAGATGAAGATGTTGCGAGAGCCCTTGTTTCTGCTTGTAAGGGTGCAGCAGAACCTGTATTGAACGCATATGATCAATTGTTATCAAATGGAGCAATTTTGCCATCCCCAAATCTTAGATTGCGGATGCTGAGATCAGTTCTAGTGGTACTTCGTGAGTGGGCTATGTCCATATATTCACACAGGATGGGAACAGGTGCCCCTGGGTCTTCCCTACTACTAGGCGGAGGATTCTCATTGGAACGTACAGTTGCTAGCCAAGGAATTCGGGACAAGATCACAAGTGTGGCAAACAGGTACATGACTGAAGTACGGAGGTTAGCACTTCCACAGAGCCAAACAGAAGCGGTTTACCGAGGCTTTAAAGAGCTTGAAGAGTCGCTCATAAGTCCTCATTCATTCAATCGATTTTGA 4455 0.442 MSWEDEIVIRDVTNAGLVVSDRIGREVSSQLDLEESLEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELIYSTGSGWQKRCRKVCVTAGLGSVISRWVIPNVFNFGTVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGDGPLKKVAEERNLVNQRDGHHGGRQSSGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSGSLNGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTIPSLLVLNRDSSTQSSPSGNLGTGTRSSRALRESVSSLPVEGRMLSVADVLPLPDTSATVQSLYSEIEFGGYESSMESCERASGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENFISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVIKGSLGDSGTSFENGVVVCRLSIGAMQVLELKLRSLERFLRSRRNQRRGLYGCVAGLGDVSGSILYGSGSALGAGDRSMVRNLFGAYSRNMESNGGGTANKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQQALVQLTFQQLVCSDEGDRLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKETLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQAIDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDTLRKEFGSPIRSASQSALDPASRKTYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLSFLQSAGRKPIHEVRAVTATTSPMGQSGAPMSPNQVKYYELLARYYVLKRQHMLAAHALLRLAGRPSTDGIPTLEQRCQYLSNGVLQAKNANNSDGLVGSTQSSSDTGLLDMLEGKLAVLRFQIKIKEELEAMASSSEVLHSTSNSVENGLVPETSSTVDANFANAAREKANELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSADSDRSIVRETWARLLDQAISRGGIAEACSVLKRVGPRLYPGDGTVLQLDIICLHLEKAGLERLNSGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGAPGSSLLLGGGFSLERTVASQGIRDKITSVANRYMTEVRRLALPQSQTEAVYRGFKELEESLISPHSFNRF* 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0313 1484 MobiDBLite consensus disorder prediction 299 321 - -
Tpr3g0313 1484 Gene3D - 1179 1460 IPR042538 -
Tpr3g0313 1484 Gene3D - 531 883 - -
Tpr3g0313 1484 MobiDBLite consensus disorder prediction 441 464 - -
Tpr3g0313 1484 Pfam Nup133 N terminal like 54 543 IPR014908 -
Tpr3g0313 1484 Coils Coil 1232 1252 - -
Tpr3g0313 1484 Gene3D Nucleoporin, helical domain, central subdomain 1056 1153 IPR042537 -
Tpr3g0313 1484 PANTHER BNAC05G49530D PROTEIN 2 1481 - -
Tpr3g0313 1484 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1481 IPR004870 GO:0005643|GO:0006913|GO:0017056
Tpr3g0313 1484 MobiDBLite consensus disorder prediction 304 321 - -
Tpr3g0313 1484 Gene3D - 894 1053 IPR042533 -
Tpr3g0313 1484 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 871 1294 IPR007187 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0313 3 3394331 3404446 Tpr3g0313 3 3394331 3404446 ECH