Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0312 ATGTCATCACCACCGAATTATGCCCACGCGCATACACCGCTCATTCGCCCCCGTCGCGTGGGCCGCACGCCAGTCCTCGCGCTCCTTCTCGGACGCCGAGGTCCTTCCGTACTTGTCCGTGAAACAGCGGCGCGTGAGCTCGAGGAACGACGCGCTGATTGGGGTTACTCGAAGCCTGTAGTATTGCTTGACATCGCCTGGAACACGGCTTTCGTGGTGGTTGCGGCGGTTATGTTAGGTTGCACCGTTGACGAGAATCCTAACACGCCGATTCGGTTGTGGATCTGTGGTTACGCGGTGCAGTGTCTGGTTCACGTGGCGTTGGTGTGGTTGGAGTACAGGAGGAGGAACGGGGTTGGAGGAGGAAGGGACGAAGAAGCTTTTGATGAAGATGTCAATGATAGTGAGGATGATGATGGTGATGTTGAATTTCGGAATTCTTCTCGCTCCGGATTTGCAAAACGATGTGCGTCGTTGAATACCATGCTTTCATTGGTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTATGGTGGTGATGTTCTAATGCAAGACGCTCCACAGTTGTACTGGTTGGCCGTTGTCTTTCTGGCATTTGATGTATTCTTTGCCATCTTTTGTGTTGCTTTGGCATGCTTAATTGGCATTGCCCTCTGCTGTTGTTTACCCTGTATTATTGGCATTCTATATGCTGTTGCGGGACAGGAGGGTGCATCTGAATCAGATCTCAGTATGCTTCCAAAATACAGGTTTCAGGCAGTAAGCAATGAAGAAACACCTGATCCAAGAGGTGGATCAATGGTTCCCATTGAAAATAGCAGTGGTGCAAATGAACGAGTACTTTCACCTGAGGATGCGGAATGCTGTATATGCATCTCTTCCTATGAGGATGGAGCAGAACTTCATGCTCTTCCTTGTAACCACCATTTCCACTCCACATGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAATACAATATTCTTAAGGGAAATGAACAGGTGTGA 1020 0.4882 MSSPPNYAHAHTPLIRPRRVGRTPVLALLLGRRGPSVLVRETAARELEERRADWGYSKPVVLLDIAWNTAFVVVAAVMLGCTVDENPNTPIRLWICGYAVQCLVHVALVWLEYRRRNGVGGGRDEEAFDEDVNDSEDDDGDVEFRNSSRSGFAKRCASLNTMLSLVWWMVGFYWVVYGGDVLMQDAPQLYWLAVVFLAFDVFFAIFCVALACLIGIALCCCLPCIIGILYAVAGQEGASESDLSMLPKYRFQAVSNEETPDPRGGSMVPIENSSGANERVLSPEDAECCICISSYEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0312 339 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 339 - -
Tpr3g0312 339 Pfam Ring finger domain 287 329 IPR001841 -
Tpr3g0312 339 SUPERFAMILY RING/U-box 278 333 - -
Tpr3g0312 339 CDD RING-H2_PA-TM-RING 287 329 - -
Tpr3g0312 339 ProSiteProfiles Zinc finger RING-type profile. 288 329 IPR001841 -
Tpr3g0312 339 PANTHER TARGET OF ERK KINASE MPK-1 5 339 - -
Tpr3g0312 339 SMART ring_2 288 328 IPR001841 -
Tpr3g0312 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 337 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0312 Tpr-Chr3 3387851 3392014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0312 1 338 C3H Transcription Factor Family AT1G68070 66.667 3.14e-169 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0312 3 3387851 3392014 Tpr3g0312 3 3387851 3392014 ECH