Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0296 ATGGTGTCAAGATCTTATTCAAATCTACTAGAGCTAGCCTCTGGTGAGTCTCCAACGTTTGAAAACATGAACAGGAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTGATGATGACCCTTTGGAGAGTGTGTGTTCTGACCCATCTTCTTCATCTGTTCAACGAGAAAGGATCATAATAGTAGCAAATCAGCTTCCTATAAAAGCTCAAAGGAAGCAAGATGGTAATAACAAAAATAATTGGTTTTTCAGTTGGGATGATAATTCACTTCTACTTCAACTCAAAGATGGGTTAGGAGATGATGATATTGATGTTATATATGTTGGTTGTCTTAAGGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCACAGATACTACTTGAGACCTTTAAATGTGTCCCAACTTTTCTTCCAGGTGATCTTTTTACAAGGTATTATCATGGCTTTTGTAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTCTGTCACCAGACCTTGGTGGTAGGTTCAATAGGTCACTGTGGCAAGCTTATGTATCAGTCAATAAGATATTTGCTGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTCATGGTTTTACCAACTTTCTTGAGAAAAAGGTTTAATAGAGTGAAACTGGGATTTTTTCTCCATAGCCCTTTCCCTTCATCAGAAATTTACAAGACATTGCCTATTAGGGAGGAGCTTTTGAGAGCCCTTTTGAACTCTGATTTGATTGGTTTCCACACTTTTGATTATGCAAGACATTTCCTCTCATGTTGTAGTAGGATGCTTGGTCTTAGCTACGAATCCAAAAGAGGTTATATTGGGATTGAGTATTATGGTAGGACCGTGAGTATCAAAATTCTTCCAGTTGGCATACACATGGGTCAGCTTCAATCAGTTCTAAGCCTACCAAAGACTGAAGAGAAAGTTGCTGAACTTATTGAACAGTTTTCTGATAAAGGAAAGATAATGTTACTTGGTGTGGATGACATGGATATCTTTAAAGGGATAAATTTGAAGCTATTGGCCATGGAACAGCTTCTTATTCAGCACCCTGAGTGGCATGGAAAGGTTGTATTGGTTCAGATAGCCAATCCTGCAAGAGGGAAAGGAAAAGATGTGAAGGAAGTGCAATCCGATACGAAGGCGACAGCGAAGCGGATTAATGATAGATTTGGTAAACCTGGTTATGATCCTGTCATTCTGATTGAGGAGCCACTAAGGTTTTATGAAAAAGTTGCATACTATGTTGTAGCTGAATGTTGTCTAGTGACTGCAGTTAGGGATGGAATGAATCTCATACCTTATGAATATATAATCAGTCGTCAAGGAACTGAAAAATTGGACAAAGTTTTGGGAATAGGTTCATCCCTTAAGAAAAGCATGTTGGTCGTGTCTGAGTTTATTGGTTGTTCACCATCTTTAAGTGGAGCTATCAGAGTGAATCCATGGAATATTGATGCAGTAGCAGATGCAGTGGACTCAGCTTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTACAAATATGTTAGTACTCATGATGTTGGTTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGCGATCATGTAAGACGAAGGTGGTGGGGAATTGGTTTCGGATTAAGTTTTAGAGTTGTAGCACTTGATCCTAACTTCAAGAAGCTCTCAATGGAGCACATTGTTTCTGCTTACAAGCGGACAAAAACTAGGGCTATCCTTCTAGATTATGATGGTACACTAATGCCCCAGGCTTCCATTGATAAGAGCCCAACCAGTAATTCCATTAAAATGCTTAATAGTTTGTGTAGAGATGAGAACAACATGGTGTTTCTAGTCAGTGCTAAAAGCCGTAAGACGCTTGCTGAATGGTTTTCTCCTTGTGAAAATCTAGGAATTGCCGCCGAGCATGGTTACTTTTTAAGACTGAAGCGGGATGCAGAATGGGAAACATGTGCTCCTGTAACAGACTCCAGTTGGAAACTAATTGCTGAGCCTGTGATGAAGCTTTACACTGAAACAACAGATGGATCAACTATAGAAGATAAGGAAACGGCACTTGTTTGGTGCTATGAGGATGCCGATCCAGATTTTGGATCATGCCAAGCTAAAGAACTTCTTAATCATCTTGAAAGTGTGCTTACAAATGAACCAGTAACAGTGAAGAGTGGACTGAATCATGTGGAGGTTAAACCACAGGGTGTGAACAAAGGGATTGTGGCTAAACGCCTGCTTTCAGCCATGCAAGGAAAGGAAATGTCACCTGATTTTGTTTTGTGTATAGGCGACGATCGATCTGACGAAGATATGTTTGAGGTAATCACTAGTTCTGGCCCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACTGTTGGTCGAAAACCCAGCAAGGCCAAGTATTATCTGGATGATACTACTGATATAGTGAGAATGGTGCAGGGTTTAGCCTGTGTTTCAGACCAAATAGTTTTATGTTAG 2562 0.4001 MVSRSYSNLLELASGESPTFENMNRRIPRIMTVAGLISDVDDDPLESVCSDPSSSSVQRERIIIVANQLPIKAQRKQDGNNKNNWFFSWDDNSLLLQLKDGLGDDDIDVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLSLPKTEEKVAELIEQFSDKGKIMLLGVDDMDIFKGINLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGKDVKEVQSDTKATAKRINDRFGKPGYDPVILIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDKVLGIGSSLKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAVDSALEMADSEKQLRHEKHYKYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTKTRAILLDYDGTLMPQASIDKSPTSNSIKMLNSLCRDENNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCAPVTDSSWKLIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNHVEVKPQGVNKGIVAKRLLSAMQGKEMSPDFVLCIGDDRSDEDMFEVITSSGPSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLACVSDQIVLC* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0296 853 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 850 - -
Tpr3g0296 853 SUPERFAMILY HAD-like 598 843 IPR036412 -
Tpr3g0296 853 TIGRFAM T6PP: trehalose-phosphatase 596 843 IPR003337 GO:0003824|GO:0005992
Tpr3g0296 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 850 IPR001830 GO:0003824|GO:0005992
Tpr3g0296 853 Pfam Trehalose-phosphatase 601 833 IPR003337 GO:0003824|GO:0005992
Tpr3g0296 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 554 - -
Tpr3g0296 853 Gene3D - 728 851 IPR023214 -
Tpr3g0296 853 Gene3D - 597 720 IPR023214 -
Tpr3g0296 853 Pfam Glycosyltransferase family 20 61 551 IPR001830 GO:0003824|GO:0005992
Tpr3g0296 853 CDD GT20_TPS 61 551 IPR001830 GO:0003824|GO:0005992
Tpr3g0296 853 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 600 801 IPR006379 -
Tpr3g0296 853 CDD HAD_TPP 599 838 - -
Tpr3g0296 853 Gene3D Glycogen Phosphorylase B; 318 535 - -
Tpr3g0296 853 Gene3D Glycogen Phosphorylase B; 53 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0296 Tpr-Chr3 3291848 3296531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0296 1 851 Trehalose Biosynthesis Gene Families AT1G68020 80.000 0.0 1451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0296 3 3291848 3296531 Tpr3g0296 3 3291848 3296531 ECH