Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0283 ATGGTGGGGAAGAATCATTCACCAAAGGAAAAGAATAGAGATTGGATTGGAGCACTTCTGAATAGTAGCTCAGGTTATTGTGATGATCATCGTGATCTTCGATCTAATGAGAAGAATACTTTCTGTGTAGATTGTGCAGTTAGATTGTGTAGGCACTGTAAGGAAGCTCATTCTATTCATAGAAGGTTTCAGATATATAGATATTCATATCAGGATGTTTTTCGTCATTGTGACTTTCAGAAGCATTTTGATTGCTCAAATATTCAGACTTACATATCCAATAACGAAAGGATTGTGCATCTAAAACCCCGGCCTCCAATTTATAAATCTAAAGCTGGTGATCAATGTCCTGAATCTAAATCCAAAGAACACAACTTATCAGCAAGATTTAAGTCTGGTGGTAGTACATGCGAAGAATGTGGAAAACACTTACAAGATGAGCGTAGTCGCTTCTGTTCCATTATATGCAAGATCTCAGTGCTTCCAAATCATCACTCACAAAAGAGTTCAGTTGATTCTTTCAACCAAAGTGGTAGATGTAACGTCACTCCAAAAACTGAGGCCATTGACTTTACTATGACTGATAACCTTAATTCGGAACCGGAGTCATCTATTTCTGAAGCTGAGCCATGTGGGCGGGTTGAAGTTCTGAATTTCAGAAAGCGTCCGAGAAAAACCACTCCTCAGAGGTCTCTCTTTGTTTTCAGTTCTTAG 714 0.3866 MVGKNHSPKEKNRDWIGALLNSSSGYCDDHRDLRSNEKNTFCVDCAVRLCRHCKEAHSIHRRFQIYRYSYQDVFRHCDFQKHFDCSNIQTYISNNERIVHLKPRPPIYKSKAGDQCPESKSKEHNLSARFKSGGSTCEECGKHLQDERSRFCSIICKISVLPNHHSQKSSVDSFNQSGRCNVTPKTEAIDFTMTDNLNSEPESSISEAEPCGRVEVLNFRKRPRKTTPQRSLFVFSS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0283 237 Pfam PLATZ transcription factor 67 158 IPR006734 -
Tpr3g0283 237 SMART bboxneu5 22 65 IPR000315 GO:0008270
Tpr3g0283 237 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Tpr3g0283 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 231 - -
Tpr3g0283 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0283 Tpr-Chr3 3206398 3208765 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr3g0283 PLATZ 4.5e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0283 3 3206398 3208765 Tpr3g0283 3 3206398 3208765 ECH