Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0275 ATGTCTGTGCCACCGGTGCAGTGTGTATACGTAACAGAAGACTGTGTTCGTGAATGGAGGAGTGGAAACCCTTCTTTCAAGGTCTCCCAACCTGTTCCAATGCTTCGCTTTCTCTACGAGCTCTCGTGGACTATGGTTCGGGGTGAATTGTCGTTTCCGAAGTGTAAAGTAGCATTAGACTCTGTTGAATTTTTGGATAAAGTCTCAGCTGAGAAAGTAGCATCAAATTTTGCAGATATAGTGAGTCAGATGGCTCAAGATCTTACATTGTCAGGAGAGTTCCGTTCTCGTCTCATTAAACTGGCAAGATGGCTTGTAGAATCAGCATTGGTTCCAGTCAGGTTACTTCAAGAACGTTGTGAGGAAGAATTTTTGGGGGAGGCTGAATTTATTAAAATTAAAGCTCAGGAGTTGAAGGGAAAAGAGGTCAGAGTTAATACCCGACTTCTTTACCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGCTATGCCAAACTGGTCACTCTACTTTGTCGGGACTCTGAAGCTCCGACTCAAAAAGGATCTGCATCAACAATTGGCATTATTAAGTCATTGATTGGCCATTTTGATTTGGATCCAAACCGTGTTTTTGATATTGTACTTGAGTGTTTTGAACTTCAGCCCGATAATGATGTGTTCATAGAGCTGATTCCTATTTTTCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTTCAATATTATCAGCGCATGGAAGTCAGTAATCCTGTACCATATGGGCTTTATAGACTTGCAGCCTTGCTGGTGAAGCAAGATTTTATTGATCTTGATTGCATATATGCTCATTTACTCCCCAAGGATGAAGAAGCATTTGAGCATTATAGCACTTTCTCTTCCAAGCGCTTTGATGAGGCTAATAAAATTGGAAAAATAAACCTTGCTGCTACTGGAAAAGATCTAATGGATGAAGAGAAAACGGGGGATGTCACTATTGATCTCTTTGCTGCTATAGCCATGGAAACTGATGCAATTGATGAGCGGAAATCCGAGCTTCATACCAGTCAAACTTTGGGCTTGCTTACTGGCTTTCTTTCTGTGGATGACTGGTATCATGCACATGTACTATTTGAACGCCTCTCACCACTGAATCCGGTGGAACATATCCAAATATGTGATAGTTTGTTTAGGCTTATTGAGAAGTCAATTTCTTCACCGTATTATGTTATTCGCCAAGCACATCTTCAAAACCCTGGATTGTCCGCTGGAGGCAGCACTGATGCTATGAACGTAGATCACCCTTCAGGACACGGTTCTTTCATAGATCTTCCAAAGGAACTTTTTCAGATGCTTGCTTGTACTGGACCTTTTCTCTACCGAGATACTATGTTGTTACAGAAGGTTTGTAGGGTGTTGAGAGGTTATTACCTTTCTGCTCTTGATCTTGTAAGTCATGGCGACAGTGCCTTGAATCCTCAATTTCATGTTATTGGAAATCCTCACCTACATTTGAAGGAAGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCTTGTCTACTACCTTCTCTACAGTTGGTTCCTGCTAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTTCTTCCTTATGAGGCACGATATCATTTATATGGTGAATGGGAAAAAGATGATGATCGCTATCCTATGCTGTTGGCTGCTAGACAAACTGCCAAGTTGGACACTAGACGCATTTTGAAACGGCTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCCAAACTAGCTCATGCCAACCCTATGACCGTCCTTCGAACAATCGTTCACCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGACGCGTTTAAGTATTTGACTCAGCTTGAATATGATATATTGGAATACGTTGTGATTGAGCGATTGGCACTTGGTGGACGTGATAAGTTGAAGGATGACGGGCTTAATTTGTCAGACTGGCTTCAATCTCTAGCTTCATTTTGGGGCCACCTATGTAAAAAGTACCCATCAATGGAATTGCGGGGCCTGTTCCAGTATCTTGTGAACCAGTTAAAAAGGGGACAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATCCAACAAATGGCAAATGTTCAGTACACAGAGAACTTGACTGAGGAACAACTGGATGCTATGGCAGGGAGTGAGACTCTGAAATATCAAGCAACTTCTTTTGGGATGACTCGAAATAATAAGGCATTGATAAAGTCAACTAGCAGGCTTAGAGATGCATTACTTCCTAAAGATGAACCAAAGTTGGCAACCCCGCTCTTGCTTCTTCTTGCTCAGCATCGTTCTCTAGTTCTCGTCAATGCAGATGCACCCTACATTAAAATGGTCAGTGAACAATTTGATAGATGCCATGGAACTCTTCTTCAATATGTGGATTTTCTAGGCAGTGCAGTCACACCAGGGTCAAATTATGCTATTCTTATTCCCTCACTTGATGACCTGGTCCATCTTTACCACTTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTTATGAGACTTTTCAAGTCTCAGAGGAGTCCCGATGTTTGCTGGCCCTTGGATGATAAAAATGCTGCAAGTGATTCATCAACGAACTTTGAGTCTGACCTTGCAGATTCTTCTGGTAGTATGGTTCTAGATATTGGCTCCAACAAAAAGCAGATTAGTTGGTCATATCTTCTTGATACTGTTAAAACCATGCTGCCTTCAAAAGCATGGAATAGCCTATCTCCTGATCTTTATGCAACATTTTGGGGTCTCACATTATATGATCTGTACGTTCCAAAAAACCGTTATGAGTCAGAGATAGCCAAGTTACATGCTAATCTTAAATCATTGGAGGAGCTTTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAAGAGAAGGAAAGAATTCAAGAATCTCTCGACCGTCTTATTAGTGAACTGCATAAACATGAAGAAAATGTTGCATCTGTCAGCAGACGGCTCTCTCATGAAAAAGACAGATGGTTAAGTTCCTGTCCTGATACCTTGAAGATTAACATGGAGTTTCTTCAGCGTTGCATATTTCCACGCTGTACTTTCAGTATGCCAGACGCAGTTTATTGTGCTATGTTTGTCCACACACTTCATTCCCTTGGAACACCCTATTTTAACACAGTCAACCACATAGATGTTCTTATTTGTAAGACTCTTCAACCAATGATATGCTGCTGCACTGAATATGAGGTTGGTAGGCTTGGCAGGTTTCTCTATGAGACTTTGAAGATTGCTTACCATTGGAAGAGTGATGAATCTATTTATGAACGTGAATGTGGAAACAAGCCGGGATTTGCTGTTTATTATAGATTTCCAAATAGCCAGCGAGTTACATACGGACAGTTCATTAAGGTACACTGGAAATGGAGTCAAAGAATCACAAGGTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAGATTAGAAATGCTCTTATAATGTTGACTAAAATTTCTAGTGTTTTCCCTGTTACACGGAAGAGTGGGATAAACCTTGAAAAGCGGGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTTTTGGCAACTGGTGTAGCAGCAGCACTGGCTGCTAGGAAGCCTTCTTGGGTTACCGAAGAAGAATTTGGTATGGGATTTCTTGAATTGAAGCCTGCACCATCTATGACCAAATCTGCAGCTGTACAAAGTGGGATAGGTCCTCATGTTTCTCAAACTGAATCTGCCAGTGGGAAACATATGGATTCTGGAAACACAGTCAAAGACCAGACAGTAAGAACTAAAACTGCAGATGGCAGAACGGAAAGCATTACAGCAGCAAAATCTGATTCTGGCCACGTAAAACTCAAGGGTAGCTCAATGCTGAATGGATTGGATGCTCAATCATCTCTACCCTCACCTGCTGGACAATCTGGGACATTAAAATCTGCGGATACTCCCAAGCAAGTGGAAGAATCCATAAGTAGGGCACCAGATGAACACGTTACAAGAAATGTTGAGTCTAGAACCTCTGTGAAACGTTCGGTGGCTACAGGGTCAGTTTTGAAGCCTTCAAAACAAGATCCTTTGAAAGAAGATGGTAGATCTGGAAAAACTGTTACTAGAACTTCTGGTTCCTCAAGCAATGACAAGGATCTTCAGACCCATGCATCAGATGGAAGACACACTGGAACAAACGTCTCATTATCAGTCAGTGCTAATGGTAACAGTGTCTCAGGTTCTGCAAAAGGCTTGGCTTCATCGGCAAAAAATGCATTTGATGGTTCTGGTAACGAATCAAAGGCAGAGGTTGGAGCTACCAAATCATCTATGGTGAAGGATGATGGAAATGATATTGCTGACTTCACAAGAGGATCCTCTTCTCGTGTAGTTCATTCCCCTAGGCATGAAAACACAGCTACCTCAAAGTCTAGTGATAAAATTCAGAAGCGTGCTGGTTCTGTTGATGAACTAGACAGACTAGGTAAACGGCGGAAAGGGGATGTAGATCTAAGAGATTTAGAGGGTGAAGTTCGATTCTCTGAAAGAGAGAAGCTGATGGATCTGCGATTGGCTGATGACAAAGTGGGACCAGATGAACTTGGTTTGTACAGACCAGGTGATAAGACGTTGGAAAGGCCAAAAGAAAAAGTAAATGAACGATATGAAAGGGAACACAGGGAAAGATTGGACCGTCTGGACAAGTCTCGTGGTGATGACTTTGTTGTAGAAAAACCTAGGGACAGGTCGATAGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGAGTTTCAATAGACTCCCTGACAAGGCTAAGGATGAAAGAAGTAAGGATGATAGAAATAAATTACGATACAATGATGCACCGATAGAAAAATCTCACGCTGAGGGCCGCTTCCATGGACAAAACTTGCCTCCACCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTGTTGGTGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACAAGGCATTCTCAAAGACTTTCTCCAAGGCACGAAGAAAAAGAACAGAGGCGGTCTGAAGAGGCTGTTATTTTGCAGGATGACCCCAAACGTAGAAAAGAAGATGATTTTCGAGATCGTAAGCGTGAAGAAATTAAGGTGGAAGAGAGGGAAAGAGAGAAAGCAAGCATTCTAAAAGAAGAGTTGTTGGATTTAAATGCTGCATCCAAGAGGCGTAAACTTAAGAGGGAGCATCTACCAACTATGGAGCCCGGGGAGTACTCACCAGTTGCTCCTGCACCTCCTCTCCCTGGTATTGGTATGTCACAAGGGTATGATGGAAGAGACAGAAAAGGGCCAATGATCCAGCATGCCAGTTACATAGATGAACCGAGTCTTAGGATTCATGGTAAAGAGGTAGCCAGCAAGCTGAATCGTCGTGAATCAGATCCCTTATATGACCGAGAGTGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGGCATCGGAAGTAA 5553 0.4246 MSVPPVQCVYVTEDCVREWRSGNPSFKVSQPVPMLRFLYELSWTMVRGELSFPKCKVALDSVEFLDKVSAEKVASNFADIVSQMAQDLTLSGEFRSRLIKLARWLVESALVPVRLLQERCEEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKGSASTIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNDVFIELIPIFPKSHASQILGFKFQYYQRMEVSNPVPYGLYRLAALLVKQDFIDLDCIYAHLLPKDEEAFEHYSTFSSKRFDEANKIGKINLAATGKDLMDEEKTGDVTIDLFAAIAMETDAIDERKSELHTSQTLGLLTGFLSVDDWYHAHVLFERLSPLNPVEHIQICDSLFRLIEKSISSPYYVIRQAHLQNPGLSAGGSTDAMNVDHPSGHGSFIDLPKELFQMLACTGPFLYRDTMLLQKVCRVLRGYYLSALDLVSHGDSALNPQFHVIGNPHLHLKEARLRVEDALGACLLPSLQLVPANPAVGQEIWELMSLLPYEARYHLYGEWEKDDDRYPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSETLKYQATSFGMTRNNKALIKSTSRLRDALLPKDEPKLATPLLLLLAQHRSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLDDLVHLYHLDPEVAFLIYRPVMRLFKSQRSPDVCWPLDDKNAASDSSTNFESDLADSSGSMVLDIGSNKKQISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVSRRLSHEKDRWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPYFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYETLKIAYHWKSDESIYERECGNKPGFAVYYRFPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTEEEFGMGFLELKPAPSMTKSAAVQSGIGPHVSQTESASGKHMDSGNTVKDQTVRTKTADGRTESITAAKSDSGHVKLKGSSMLNGLDAQSSLPSPAGQSGTLKSADTPKQVEESISRAPDEHVTRNVESRTSVKRSVATGSVLKPSKQDPLKEDGRSGKTVTRTSGSSSNDKDLQTHASDGRHTGTNVSLSVSANGNSVSGSAKGLASSAKNAFDGSGNESKAEVGATKSSMVKDDGNDIADFTRGSSSRVVHSPRHENTATSKSSDKIQKRAGSVDELDRLGKRRKGDVDLRDLEGEVRFSEREKLMDLRLADDKVGPDELGLYRPGDKTLERPKEKVNERYEREHRERLDRLDKSRGDDFVVEKPRDRSIERYGRERSVERMQERSFNRLPDKAKDERSKDDRNKLRYNDAPIEKSHAEGRFHGQNLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKEQRRSEEAVILQDDPKRRKEDDFRDRKREEIKVEEREREKASILKEELLDLNAASKRRKLKREHLPTMEPGEYSPVAPAPPLPGIGMSQGYDGRDRKGPMIQHASYIDEPSLRIHGKEVASKLNRRESDPLYDREWDDEKRQRADQKRRHRK* 1851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1385 1412 - -
Tpr3g0275 1850 Coils Coil 1722 1752 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1315 1336 - -
Tpr3g0275 1850 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Tpr3g0275 1850 PANTHER THO COMPLEX SUBUNIT 2 11 1760 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1672 1739 - -
Tpr3g0275 1850 Coils Coil 972 1006 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1315 1412 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1437 1505 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1245 1298 - -
Tpr3g0275 1850 PANTHER THO2 PROTEIN 11 1760 IPR040007 GO:0000347|GO:0006397|GO:0006406
Tpr3g0275 1850 Coils Coil 944 964 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1485 1505 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1808 1842 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1245 1294 - -
Tpr3g0275 1850 Pfam Transcription factor/nuclear export subunit protein 2 921 1215 IPR021418 -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1338 1354 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1760 1850 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1467 1484 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1541 1739 - -
Tpr3g0275 1850 MobiDBLite consensus disorder prediction 1541 1648 - -
Tpr3g0275 1850 Pfam THO complex subunit 2 N-terminus 69 414 IPR032302 -
Tpr3g0275 1850 Pfam THO complex subunit 2 N-terminus 444 590 IPR032302 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0275 Tpr-Chr3 3135320 3154076 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0275 3 3135320 3154076 Tpr3g0275 3 3135320 3154076 ECH