Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0274 ATGGTAAAAGTTGAATTGAGTTTTGGAGGCTCATTCAATTTTGTTTTGGTTTTGATGTTTTATGTTTTCGTTATCCCAACAAGGTGTCAAGATGAAGTGGTAATGAATATTTTGAAGAACAGCATAAGTGCTCCAATTGTACTCCAATGGACAGATCCTAATGTATGTAAATGGAAGAACATCAATTGCGACTCAAGAAATCGTGTCACTGATATTAAATTAGCGAACCAAACCCTTCAAGGCATTCTCCCAAAAGAACTTGTGAAGCTGACAGCTTTGCAACGTTTCGAGTGTCAAAGCAATGGCCTCACAGGTCCATTCCCTTACCTCTCGAAATCCTTACAAAGGCTTATAATCCACGACAACCAATTCACCTCTATTCCTAGCAATTTCTTCACGGGAATGAGAAATTTGCAAGAAGTCAATATTGATGACAACCCATTGTCTCTGTGGCAAATTCCTAATTCTCTAAGAGACTGTGTTGCACTCCGATATTTTAGTGCTCATAATGCTGGCATTAATGGGACTATTCCTGATATTTTTGGCAGAGATGGTCCCCTTTCCGGGTTGGTTTTTTTGGAATTATCTAGTAATTATTTAGAAGGTGTATTGCCTGCAAGTCTTTCTAGCAGTTCAATAGAGTTTCTTTTGGTGAATGGACAAAATAGCAATAATAAGCTCACGGGTACCCTAGATGTGTTACAAAACATGACATCTTTGAAAAAAATATGGGTTAATGACAATTCATTTACCGGACCTATACCTGATGTGTCACGCCTTGATCAACTGTCTGATATAAATTTAAGAGATAACCAGTTGACCGGTGTTGTTCCACCTTCTTTAGTTAATCTTCCAAACTTGGGACTTGTGAAATTAACAAACAATTATCTTCAAGGTTCACCTCCCAAATTTAGAAATGGAGTTGAAGTTGATAATAATATGGTCGGGAGTAGAAATCAGTTTTGCACAAATGTTCCAGGGCAACCATGTAGTCCTCTTGTGAATGTTTTGCTATTAGTTATTGAACCTTTGGGTTATCCTCTTGAGTTCGCTGAAAATTGGCAAGGTAATGATCCTTGTGCTAATAAATGGGTTGGTATAGTTTGTGCTGATGGAAATATTTCAGTTATTAACTTTCAAAACATGAGATTAACTGGTCATATTTCTCCAAATTTTGCCAGTCTTTCATCTTTAACAAAATTACTCTTTGCAAACAATAGTCTCACAGGTACCATACCAAACCAACTTACTAGTATGCCTCTTCTACAAGAATTTGATGTTTCCAATAATCACTTGTATGGTCGTGTGCCATCATTTTCTGAAGGTGTTGTTCTTAAATTAGGTGGAAATCCCGACATTGGAAAGGATAAACCCAGTACTAGTGATAACCTTGGGTTGGGAGGTAGTGGTAACAAAAGTAATGGTGTCAGTGTCATTGTCGGAATTATTTTGGGAATTGTCATTTTACTTTGTATTGGGGCACTATTAATTATTAAGTTTGGAAAAAGGTTTAGGATTCATACGAGGATGGGTAAACATCCTGATGCTATAAAGGTACATCATAAATATCAATGGGATGAGAATGATGTGAAGGTAAGTGTTGTTAGCAATGGTGAAGTAAGTGGTGTATTGAGTACCACTGGTAATGTTTATGAAGCTAGTAACATGGTGATTTCAATTCAAGTTTTGAGACAAGTTACATATAATTTTTGTGAGGAAAAAATAGTCGGGAAGGGTGGTTTTGGCACTGTTTACAAAGGGGAATTGCACGATGGGACACAAATTGCGGTGAAAAGGATGCAATCAGGAATGGGGGATGAGAAAGGACCGAATGAATTCACGTCGGAGATTGCAGTTCTTACAAAAGTTCGACACAAACATTTGGTTTCACTATTAGGGTATTGCTTAGATGGAGATGAAAGACTTTTGGTTTACGAGTACATGCCTCAAGGTGCTTTGAGCAGACATTTGTTCAATTGGAAAGAGGAAGGGATAAAACCACTAGAATGGAAGACAAGGCTTAGTATTGCCTTAGATGTTGCTAGGGCTGTAGAATATCTTCATGGGTTTACCCAACAAATTTTTATCCACAGGGATCTCAAACCATCCAACATTTTGCTTGGAGATGATATGCGGGCTAAAGTATCTGACTTTGGATTGGTGCGGCTTGCTCCCGAAGGAAAACTTTCATTTCAAACTAGACTTGCTGGAACTTTTGGATATATGGCACCGGAGTATGCTGTCACCGGAAGACTAACAACAAAGGCCGATGTGTATAGTTTTGGTGTGATTCTGATGGAGATAATAACAGGAAGGAAAGCTCTCGATGATACCCAACCAGAAGAGAATATCCACCTTGTTACATGGTTCCGTAGGATGTTATTGAATAAGAGTTCGTTCCAAACAATCATTGACCAAACAATTGAGGTTGATGAAGAAACCTATGCAAGCATCAATACAGTTGCTGAGTTGGCAGGACATTGTAGTGCAAGGGAGCCTCATCAACGTCCCGACATGAGTCATGCAGTGAATGTATTATCATCTCTTGTTGAAGTGTGGAAGCCCTCAGAACAAGATGTTGATGACATATATGGAATCAACTTTGATATGACATTACCAGAAGCTCTCCAAAGGTGGCAAGCTTTCGAAGGAAGAAGCACTCTTGATTTAACTCTTTCCCCCTCACCAATGCAAACTACTGGAGACAACTCACATACTTCTGAATCCCCCAAGGTGCCTTCAGATGCACGAAAGTGA 2757 0.3877 MVKVELSFGGSFNFVLVLMFYVFVIPTRCQDEVVMNILKNSISAPIVLQWTDPNVCKWKNINCDSRNRVTDIKLANQTLQGILPKELVKLTALQRFECQSNGLTGPFPYLSKSLQRLIIHDNQFTSIPSNFFTGMRNLQEVNIDDNPLSLWQIPNSLRDCVALRYFSAHNAGINGTIPDIFGRDGPLSGLVFLELSSNYLEGVLPASLSSSSIEFLLVNGQNSNNKLTGTLDVLQNMTSLKKIWVNDNSFTGPIPDVSRLDQLSDINLRDNQLTGVVPPSLVNLPNLGLVKLTNNYLQGSPPKFRNGVEVDNNMVGSRNQFCTNVPGQPCSPLVNVLLLVIEPLGYPLEFAENWQGNDPCANKWVGIVCADGNISVINFQNMRLTGHISPNFASLSSLTKLLFANNSLTGTIPNQLTSMPLLQEFDVSNNHLYGRVPSFSEGVVLKLGGNPDIGKDKPSTSDNLGLGGSGNKSNGVSVIVGIILGIVILLCIGALLIIKFGKRFRIHTRMGKHPDAIKVHHKYQWDENDVKVSVVSNGEVSGVLSTTGNVYEASNMVISIQVLRQVTYNFCEEKIVGKGGFGTVYKGELHDGTQIAVKRMQSGMGDEKGPNEFTSEIAVLTKVRHKHLVSLLGYCLDGDERLLVYEYMPQGALSRHLFNWKEEGIKPLEWKTRLSIALDVARAVEYLHGFTQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKLSFQTRLAGTFGYMAPEYAVTGRLTTKADVYSFGVILMEIITGRKALDDTQPEENIHLVTWFRRMLLNKSSFQTIIDQTIEVDEETYASINTVAELAGHCSAREPHQRPDMSHAVNVLSSLVEVWKPSEQDVDDIYGINFDMTLPEALQRWQAFEGRSTLDLTLSPSPMQTTGDNSHTSESPKVPSDARK* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0274 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Tpr3g0274 918 PANTHER OSJNBA0070M12.3 PROTEIN 10 913 - -
Tpr3g0274 918 MobiDBLite consensus disorder prediction 894 918 - -
Tpr3g0274 918 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Tpr3g0274 918 Gene3D Phosphorylase Kinase; domain 1 533 647 - -
Tpr3g0274 918 SMART serkin_6 570 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0274 918 Pfam Leucine rich repeat 113 167 IPR001611 GO:0005515
Tpr3g0274 918 Gene3D Ribonuclease Inhibitor 30 328 IPR032675 -
Tpr3g0274 918 MobiDBLite consensus disorder prediction 894 910 - -
Tpr3g0274 918 Gene3D Ribonuclease Inhibitor 334 457 IPR032675 -
Tpr3g0274 918 Pfam Leucine rich repeat N-terminal domain 347 369 IPR013210 -
Tpr3g0274 918 Pfam Leucine rich repeat N-terminal domain 38 64 IPR013210 -
Tpr3g0274 918 CDD STKc_IRAK 576 849 - -
Tpr3g0274 918 Pfam Protein tyrosine and serine/threonine kinase 573 844 IPR001245 GO:0004672|GO:0006468
Tpr3g0274 918 SUPERFAMILY L domain-like 35 440 - -
Tpr3g0274 918 Gene3D Transferase(Phosphotransferase) domain 1 648 869 - -
Tpr3g0274 918 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 10 913 - -
Tpr3g0274 918 ProSiteProfiles Protein kinase domain profile. 570 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0274 918 SMART LRR_typ_2 135 160 IPR003591 -
Tpr3g0274 918 SMART LRR_typ_2 187 210 IPR003591 -
Tpr3g0274 918 SMART LRR_typ_2 395 419 IPR003591 -
Tpr3g0274 918 SMART LRR_typ_2 284 306 IPR003591 -
Tpr3g0274 918 SMART LRR_typ_2 112 134 IPR003591 -
Tpr3g0274 918 SUPERFAMILY Protein kinase-like (PK-like) 553 855 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0274 Tpr-Chr3 3130957 3133986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0274 72 852 Receptor kinase-like Gene Family AT5G07280 31.219 9.39e-83 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr3g0274 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0274 3 3130957 3133986 Tpr3g0274 3 3130957 3133986 ECH