Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2985 ATGGAAAGAGATTTCATGGGTCTATCCTCAAAAGAATCATTACCTACGACAAAGCATGAGATTAACAATGAAGGCTCCAAAGACTCAGGTTTTACAAAAGTTTCAGCAGTAAAATGGCCGTTCATGAACAAAGTCTCGGCTCATCCATATATGATGCCTTTTAATGTTTATGAAGAAGATAAGGCTAAAATGATATCTTCTGGTTTCATAGAGAAATCTTTCAAACATGATGGACAAGGTGGCTTTCATTTTTCCGCAAATCCGTATCATGTACAACATGATGTGAATTATATGAATCGTCCTCATGATGCAAAGATGTTTTCAGTTTCCGCGGGACATTCGTTCCTAAAGAATCATTTTGCAACTTTTGGTCAGAACATGAATGGCCCTAATGTGAAGCAGCCTCTACTTGGGGGATTATCTGTTACAAAACCTCATCCAGTTCTTCCAATCGGTGGTACTGTTGCTGGTTTGACTGAACCATGTGTGAAACCATCTGCATCTGCTTCTCAACTTACCATGTTCTATGCCGGTACTGTGAACGTCTTCAATGATATCACTCCTGAGAAGGCAAAAGCCATCATGTTGTTGGCTGGAAGTGGCATATCTGCAGCTTCAAACTTGGTTCAACCTGAAGTTCAGGCACCTAGTTCAAAGTTCGCATCGGGTGATGATGGTGTGCCTATGAGTCCACCTGTAAATATACCACCCTCCTCCGGTATTTCTAGTCCTTTATCTGTTTCTTCACACACCGGTCCACAATCAGGGAGTGGCTCAAGTAGCAGTGATGAATTTCTAGCTGCTAAAACATCTAGAGGTCCTACTCCTACGACCTCTGCTAGCAAAGTGGAGACTCCAAAAGTAGTCAATGCAACCACCATGTTTTCGTCAGCTATACCGCAGGCCCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAGAGGGTGATGAGTGCAGCACCATATAACCTCAACAACAAAAATTCCGAGGATGCTCCAATGCCAAATTCAGTGGTTGCAGCGAAGCAAGGATAA 1041 0.4294 MERDFMGLSSKESLPTTKHEINNEGSKDSGFTKVSAVKWPFMNKVSAHPYMMPFNVYEEDKAKMISSGFIEKSFKHDGQGGFHFSANPYHVQHDVNYMNRPHDAKMFSVSAGHSFLKNHFATFGQNMNGPNVKQPLLGGLSVTKPHPVLPIGGTVAGLTEPCVKPSASASQLTMFYAGTVNVFNDITPEKAKAIMLLAGSGISAASNLVQPEVQAPSSKFASGDDGVPMSPPVNIPPSSGISSPLSVSSHTGPQSGSGSSSSDEFLAAKTSRGPTPTTSASKVETPKVVNATTMFSSAIPQARKASLARFLEKRKERVMSAAPYNLNNKNSEDAPMPNSVVAAKQG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2985 346 MobiDBLite consensus disorder prediction 240 285 - -
Tpr1g2985 346 PANTHER PROTEIN TIFY 7 15 333 - -
Tpr1g2985 346 MobiDBLite consensus disorder prediction 322 346 - -
Tpr1g2985 346 Pfam tify domain 167 199 IPR010399 -
Tpr1g2985 346 MobiDBLite consensus disorder prediction 1 27 - -
Tpr1g2985 346 Pfam Jas motif 300 324 IPR018467 -
Tpr1g2985 346 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 333 IPR040390 -
Tpr1g2985 346 SMART tify_2 165 200 IPR010399 -
Tpr1g2985 346 ProSiteProfiles Tify domain profile. 165 200 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2985 Tpr-Chr1 34286455 34290236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2985 37 334 Tify Gene Family AT3G17860 35.604 4.95e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr1g2985 tify 9.4e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2985 1 34286455 34290236 Tpr1g2985 1 34286455 34290236 ECH