Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2973 ATGGCGGAAGCTCTCTCCGTTATGCCAGCGGCCGTGCTACGTAACCTTGCTGATAAGCTCTATGAGAAACGGAAAAATGCTGCTCTTGAGGTTGAGGGGATTGTTAAGCAGCTTGCTTCTGCTGGGGATCATGATAAGGTAAATGCTGTGATCGATTTGTTGACTACGGAATACACGAATTCGCCGCAAGCAAATCATCGCAAGGGAGGGTTGATAAGCTTAGCTGCTGCTACTGTTGGGCTGACTAATGAAGCTGCTCAGCATCTTGATAGAATTGTGCCTCCAGTGTTAAATTCTTTCTCGGATCAAGATAGCAGAGTTCGTTATTATGCATGTGAAGCACTATATAACATTGCTAAGGTTGTGAGAGGAGATTTTATTGTATACTTCAACTTGATCTTTGATGCCTTATGCAAGCTTAGTGCAGATTCAGATGGCAATGTACAAAGTGCTGCACATCTCTTAGATCGACTCGTGAAGGATATTGTGACCGAGAGCGATCAGTTCAGGTGCACTCTCTTCTCACTATTTAGCTATATGCTTCTTTGTATGACTATCTTGTGTTTCAAAGAGACTTGTACTCTTGTAGATATGTGGATCTCTGTATGTAACTTACACTGCTTCATACCCCACCGCTTTCATTTCTTGATATTCAGTATTGAAGAATTTATACCATTATTGAGGGAGCGCATGAATGTACTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAACATGTTGAGCGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCACGAGATAAAGAACTCCCCATCTGTAGATTATGGTAAAATGGCTGCAATACTGGTACAGAGGGCTGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCGATACTATGCTGACATTCTTGGAGCTATTTTGCCTTGCATATCCGATAAAGAAGACAAAATTAGAGTGGTTGCTAGGGAAACCAATGAAGAGCTACAAGCAATCAATGCTGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCAATTGCAAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATCGAAGCTTTGCACTGGATATCAATCCTTTTAAACAGACATCGTGTTGAGGTTTTGACATACCTTAATGATATATTTGACACCCTACTGAAAGCACTTTCAGATCCATCTGATGAGGTTGTTCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAGAGATCCTCTGCACTTCCGTCATCTTGTCGTTTTCCTTGTGCACAATTTCAGGCTAAATAATTCTCTTTTGGAGAAGCGCGGTGCTTTGATAATTCGTCGTCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATATTAGAAGGAGAATCAGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTGTCTGAGATTCGAGATCTTTTGAAGCAGTCACTGGTAAATCCTGCCGGGAAGGACTTGTATGTTTCTTTGTATGCGTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTTTTAGCTCAGACTTACCGACATGCAAGTGCTGTTATTCAATCTCTGGTAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAATTAGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTATCTCAGATTGCAGCTTCTCGATCCTGGAAGATATTTATGGCTATTCAAAGCATTGTATGGTCTTTTGATGTTGCTTCCTCAGCAAAGTGCAGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCGTCATATTCTTTCAATCGCGCGCAACTGAATAGAATGCCTTCTGGGGATTACTACCAATTTGTTCCTCAGATGCCTGATGACAATCATACAGAAGAGGATGGTGGGAGCTCATATAATGGATTAAACTTTGCTACAAGGTTACAACAGTTTCAGCAAATGCAGCAGCAACATAGGGTACACACTAAATCGCGAAGAGCATCACGCAGTTTATCCACTTCCTTACCAAAGGAGGCACAAAAAGAGGAAGAACCACATAGACCTCAGTCTACTGATCTTAATGTTCCTCCTTCAAGACCAAGGAGAAATTCAGGGCAACTACAACTATAA 2301 0.4081 MAEALSVMPAAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDKVNAVIDLLTTEYTNSPQANHRKGGLISLAAATVGLTNEAAQHLDRIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVYFNLIFDALCKLSADSDGNVQSAAHLLDRLVKDIVTESDQFRCTLFSLFSYMLLCMTILCFKETCTLVDMWISVCNLHCFIPHRFHFLIFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLHEIKNSPSVDYGKMAAILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVRYYADILGAILPCISDKEDKIRVVARETNEELQAINADPAEAFDVGAILSIARRQLSSEWEATRIEALHWISILLNRHRVEVLTYLNDIFDTLLKALSDPSDEVVLLVLDVHACIARDPLHFRHLVVFLVHNFRLNNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYRHASAVIQSLVEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLDPGRYLWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNRAQLNRMPSGDYYQFVPQMPDDNHTEEDGGSSYNGLNFATRLQQFQQMQQQHRVHTKSRRASRSLSTSLPKEAQKEEEPHRPQSTDLNVPPSRPRRNSGQLQL* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2973 766 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Tpr1g2973 766 PANTHER PROTEIN VAC14 HOMOLOG 4 174 - -
Tpr1g2973 766 PANTHER PROTEIN VAC14 HOMOLOG 218 736 - -
Tpr1g2973 766 MobiDBLite consensus disorder prediction 710 766 - -
Tpr1g2973 766 Pfam Vacuolar protein 14 C-terminal Fig4p binding 478 657 IPR021841 -
Tpr1g2973 766 Gene3D - 192 293 IPR011989 -
Tpr1g2973 766 SUPERFAMILY ARM repeat 11 591 IPR016024 -
Tpr1g2973 766 Gene3D - 294 458 IPR011989 -
Tpr1g2973 766 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Tpr1g2973 766 MobiDBLite consensus disorder prediction 748 766 - -
Tpr1g2973 766 PANTHER TAX1 BINDING PROTEIN-RELATED 4 174 IPR026825 GO:0006661|GO:0070772
Tpr1g2973 766 PANTHER TAX1 BINDING PROTEIN-RELATED 218 736 IPR026825 GO:0006661|GO:0070772
Tpr1g2973 766 Gene3D - 2 184 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2973 Tpr-Chr1 34128228 34138520 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2973 1 34128228 34138520 Tpr1g2973 1 34128228 34138520 ECH