Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2966 ATGGAGGAAATTTTCGGCGACGGAGGTGCAGTTGCAACGCCGGTGCCGCTTTCGGTGTCCGGATCGTTTAGAGAAGGGAGAGGCTCGTCGAGGAGACGTGGTTCTGCTAGACAGCCGAGTATGGATGCTGATGAGTTCATGAATTTGTTGCACGGTTCGGATCCAGTGAAGGTTGAGCTTAATCGTCTCGAGAATGAAGTTCGAGATAAGGATAGGGAATTATCAGAAGCACAAGCTGAGATTAAAGCTTTGAGGCATTCTGAACGATTAAGAGAAAAAGCTGTTGAAGAGCTATCTGAAGAGCTGTCAAAGGTTGATGGGAAGCTAAAATTAACGGAATCTCTATTAGAAAGCAAAAATCTCGAAATAAAGAAAATCAATGACGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCAGAAGCTACTCTTCGAAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCGATAGAAGCAATTCTTGCTCCTTTAGAGGCTGAACTAAAGCTTGCTCGGCAAGAGATTGCTAAACTACAAGATGACAACAGAGCCTTAGACCGTCTTACCAAATCCAAAGAAGCTGCACTACTTGAAGCTGAAAAGACTGTTCAGTTTGCCATGGCTAAGGCATCCATGGTAGATGATCTCCAAAACAAAAATCAAGAGCTGATGAAACAGATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGATAGAATGCATAGACAAAAGGTGGCAGAGGTTGAAAAGCTCACCCAAACTGTGAGGGAGCTAGAAGAGTCAGTCCTTGCAGGTGGTGCAGCAGCAAATGCAGTGAGAGATTATCAACGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTTAATAGGGAGTTGGGCCGTGCCAAGGTTACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGTTATGCCTGTCAAACAATGGCTTGAAGAACGACGATTCTTGCAGGGGGAAATGCAACAACTTCGTGATAAGCTTGCTATAGTTGAGCGCACTGCAAAATCTGAAGCACAGTTGAAAGAAAAATACCAATTACGGCTTAAAGTGCTAGAGGAGAGTTTGAGGGGCAATTCTAGTGGCAGTAGTCGCAGCATCGCAGAGGGAAGAAGTATGAACAATGGTTCTTCTCGTCGCCAATCACTAGGTGGAGCTGATAATATCTCAAAACTAACCTCTAATGGATTCTTGCCTAAGAGAGCACCATCCCCTCAACTCAGGTCATCCCTATCATCTAGCACAATATTGAGGCATGCTAAAGGATCATCTAAATCTTTTGATGGTGGCTCAAGGACACTGGACAGGAGTAAAACGCTGCTCAGTGGAGCACCTCAAAGTTACTCATTCAACCAATCTCGTGAAGAAACCAAAGAGAGAGAGGCAGATGATAATTGGAAAGGAAATTCAGGTGATAAGCCAAATGACTTTCCACCGGGGGATACAGAGGATAGTATTCCGAGTGTTTTATATGACCTCTTGCAGAAAGAGGTCATTGCTTTGAGGAAAGCTGGTCATGAGAAAGATCAAAGCCTAAAAGATAAAGATGATGCCATTGAGATGTTAGCAAAGAAGGTGGATACATTGACCAAAGCCATGGAAGTTGAGGCGAAGAAGATGAGAAGAGAAGTAGCTGCCATGGAAAAGGAGGTAGCTGCTATGCGCGTCGATAAAGTACAAGAGAACAGAGCAAAGCGGTTCAGCAATGTAAAGGGTCCTGTAAACAGTGCACAGAATCAGCTTATTTCTGGAAGAAATGTGACACGAGGAGGATTGACACGGAGCACCCAATAA 1842 0.437 MEEIFGDGGAVATPVPLSVSGSFREGRGSSRRRGSARQPSMDADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELSEELSKVDGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKSKEAALLEAEKTVQFAMAKASMVDDLQNKNQELMKQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEESVLAGGAAANAVRDYQRKVQEMNEERKTLNRELGRAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIVERTAKSEAQLKEKYQLRLKVLEESLRGNSSGSSRSIAEGRSMNNGSSRRQSLGGADNISKLTSNGFLPKRAPSPQLRSSLSSSTILRHAKGSSKSFDGGSRTLDRSKTLLSGAPQSYSFNQSREETKEREADDNWKGNSGDKPNDFPPGDTEDSIPSVLYDLLQKEVIALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVDKVQENRAKRFSNVKGPVNSAQNQLISGRNVTRGGLTRSTQ* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2966 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 1 613 - -
Tpr1g2966 613 Coils Coil 60 87 - -
Tpr1g2966 613 Coils Coil 215 263 - -
Tpr1g2966 613 Coils Coil 95 129 - -
Tpr1g2966 613 Coils Coil 274 301 - -
Tpr1g2966 613 MobiDBLite consensus disorder prediction 583 613 - -
Tpr1g2966 613 Pfam Microtubule-associated protein 70 44 594 IPR009768 GO:0007010|GO:0008017
Tpr1g2966 613 Coils Coil 323 357 - -
Tpr1g2966 613 Coils Coil 163 190 - -
Tpr1g2966 613 MobiDBLite consensus disorder prediction 374 502 - -
Tpr1g2966 613 MobiDBLite consensus disorder prediction 585 613 - -
Tpr1g2966 613 Coils Coil 546 573 - -
Tpr1g2966 613 MobiDBLite consensus disorder prediction 469 486 - -
Tpr1g2966 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 1 613 IPR009768 GO:0007010|GO:0008017
Tpr1g2966 613 MobiDBLite consensus disorder prediction 1 44 - -
Tpr1g2966 613 MobiDBLite consensus disorder prediction 374 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2966 Tpr-Chr1 34043017 34049221 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2966 1 34043017 34049221 Tpr1g2966 1 34043017 34049221 ECH