Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2965 ATGGCGACTATGACGAGTTTGATCGGTCTCATCAACAAGATCCAACGTGCATGTACTGTTTTAGGTGACCACGGCGGCGAGGGTTTGTCACTCTGGGAAGCTCTTCCTTCCGTCGCCGTCGTTGGAGGACAGAGTTCAGGGAAATCGTCGGTGTTGGAGAGTGTGGTTGGAAGGGATTTTCTGCCTCGTGGATCTGGTATTGTCACACGGAGGCCATTAGTGTTGCAACTTCACAAGACAGATGATGGACAACAAGATTATGCTGAGTTTCTTCATGCACCCAGAAAGAGATACACTGATTTCGCTGCTGTAAGGAAGGAAATATCAGATGAAACAGATCGTATAACTGGGAAGTCAAAGGCAATTTCAAACATTCCAATTCAACTCAGCATATATTCTCCAAATGTTGTGAACTTAACCCTCATAGATCTTCCCGGATTGACAAAGGTTGCTGTTGAGGGACAATCAGAAAGTATTGTTCAAGATATTGAAAACATGGTCCGATCCTATGTTGAGAAGCCTAACTGCATTATCTTGGCCATCTCTCCTGCAAACCAAGATATTGCCACTTCAGATGCAATAAAAATTGCAAAAGAAGTTGATCCTTCAGGTGATAGAACATTTGGAGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCCGTAGAGGTTCTGGAAGGAAAGCATTACAGGTTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCAGATATTAATAAAAATGTTGACATGATTGTTGCTCGCAAGAAGGAGCGTGAATATTTTGAGACGAGCCCTGAATATGGACATCTGGCACATAAAATGGGTGCAGAATATCTTGCCAAGCTTCTATCTGAGCATCTGGAGGTCGTCATTAGGCAGCGGATTCCTAGTATTGTTGCCTTAATAAACAAAACCATTGACGAGCTTAATGCAGAGTTGGACCGTATTGGCAGGCCTATAGCTGTGGATTCAGGGGCCCAACTCTACACTATTTTAGAGATGTGTCGAGCATTTGACAAAGTATTTAAAGAACACATCGACGGAGGACGTCCAGGTGGGGACAAAATTTATGGCGTTTTTGACAATCAATTACCGGCTGCTTTGAAAAAGCTCCCCTTTGATCGCCATCTTTCCATAAAAAACGTACAGCGAGTCGTTACAGAAGCCGATGGTTATCAGCCCCATCTGATTGCCCCAGAGCAAGGGTACAGAAGACTTATTGAAGGATGTTTAGGTTATTTCAAAGGCCCAGCTGATGCCTCTGTGGATGCTGTCCACCTTGTTTTAAAGGAACTTGTGCGAAAAGCAGTTGCAGCAACTGAGGAATTGAAGAGGTTTCCAACACTTAAAAATGAAATAGCTGCAGCTGCAAATGATTCTTTGGAAAGATTCCGAGAAGAAAGTAGGAAGACAGTGACCCGGCTAGTTGATATGGAGTCTAGCTATCTAACAGTAGAGTTTTTTCGGAAGATTCATCTTGAACCAGAAGCGAACCAGAAAGAAAGTCGGAATGCTCCTAATCCCAATCTGGACAATTTCTCAGATAATCACCTCCGGAAAATTGGATCAAATGTTAATGCCTATATCAACATGATTTGTGACACACTTAAAAATTCTATACCAAAAGCTGTGGTTTATTGTCAAGTTAGAGAGGCGAAGAGATCATTGCTCAATCGCTTTTATGTTCAAGTTGGGAGAAAAGAGAAGGAGCAACTTGGGGCCATGTTGGATGAAGATCCTGCACTTATGGAAAAAAGATTACAATTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGACATTGATTCAGTGGCATGGAAATAA 1845 0.4238 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDDGQQDYAEFLHAPRKRYTDFAAVRKEISDETDRITGKSKAISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQSESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAKEVDPSGDRTFGVLTKLDLMDKGTNAVEVLEGKHYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGAEYLAKLLSEHLEVVIRQRIPSIVALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHIDGGRPGGDKIYGVFDNQLPAALKKLPFDRHLSIKNVQRVVTEADGYQPHLIAPEQGYRRLIEGCLGYFKGPADASVDAVHLVLKELVRKAVAATEELKRFPTLKNEIAAAANDSLERFREESRKTVTRLVDMESSYLTVEFFRKIHLEPEANQKESRNAPNPNLDNFSDNHLRKIGSNVNAYINMICDTLKNSIPKAVVYCQVREAKRSLLNRFYVQVGRKEKEQLGAMLDEDPALMEKRLQLAKRLELYKQARDDIDSVAWK* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2965 614 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Tpr1g2965 614 Pfam Dynamin central region 222 489 IPR000375 -
Tpr1g2965 614 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Tpr1g2965 614 Gene3D Dynamin, middle domain 327 577 - -
Tpr1g2965 614 Gene3D - 4 310 IPR027417 -
Tpr1g2965 614 PRINTS Dynamin signature 35 53 IPR022812 -
Tpr1g2965 614 PRINTS Dynamin signature 60 77 IPR022812 -
Tpr1g2965 614 PRINTS Dynamin signature 133 150 IPR022812 -
Tpr1g2965 614 PRINTS Dynamin signature 183 201 IPR022812 -
Tpr1g2965 614 PRINTS Dynamin signature 202 218 IPR022812 -
Tpr1g2965 614 PRINTS Dynamin signature 225 244 IPR022812 -
Tpr1g2965 614 PANTHER DYNAMIN 4 614 IPR022812 -
Tpr1g2965 614 Pfam Dynamin GTPase effector domain 521 611 IPR003130 GO:0003924|GO:0005525
Tpr1g2965 614 PANTHER BNAA09G45430D PROTEIN 4 614 - -
Tpr1g2965 614 Pfam Dynamin family 38 213 IPR045063 -
Tpr1g2965 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Tpr1g2965 614 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Tpr1g2965 614 SMART GED_2 518 611 IPR003130 GO:0003924|GO:0005525
Tpr1g2965 614 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Tpr1g2965 614 ProSiteProfiles GED domain profile. 523 614 IPR020850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2965 Tpr-Chr1 34034318 34041759 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2965 1 34034318 34041759 Tpr1g2965 1 34034318 34041759 ECH