Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2961 ATGTGTAAGACAATTCAAATACATGGATTCCCATCCAATGTTTCTGCTGAAGAGGTAACAAAATTTTTGGAACAACATGCTGGCTTCCAAACTGTTCTTGCTGTAAAGATTGAGCAGCATAAAGATGAAGATTCTATGGCACATGTTAAAGTTCAATTCACAGACAAAAAAAGTGTTGAAACAATCTTAAACATGGTTACTAATAAACACCTATCTTACATTAACTATGTTTTAAATGCTACATTAATAAAACCTGACATTTTGTCAAAGCCAAGAATCTTTGCTTACAATATGGATGGTATTGGAATTCACTTTGGTTGTCAAACATCTAAGAGAAAACTTAGTGTGCTATGGGAACATTCAAATGCTTCTGTTAAATTTGGAGCTAGATTGAGAAAAATGTATATATTTTTTCGATATTTGTCTAAGGATTATAAGATGCAGATCAATTCCGAGAGTATATCGCGAATTGAGCTTCATCACTCCCATTGTCGTACCAAGAAGCTTCTCCTTTTTCAGTTACGTAGCGCTCCTCGGATCTACGAGAAAGAGGTTTCCGAAATCAAGTACTTTAAGGAAGCTTATGACAACCATTGGTTTAGAAGTGTAGATTTCACCTCATCAGGCTGTATTGGACAATCATCTGCTTTGTGTTTTAAGCTTCCACAAAGTACCGAGCTTCCGAATTTTCGTCACCACTTTCGAAATTATTATAAATTTGATGACACCTTTGATCTTGAAAAACAACCTGGTTTCCCATCAAAATTCGATTTTGTCCCCATGGTGATTCCACCAGAAGGATTCACTTTGCCATACAAATTTCTGTTCAAAATTAACTCATTAGTTCAACATGGTTGCCTTCCTTTGCAAGCAATCGACACCGACCTTTTTCATATGGTTGATCCAAAAAGAATAAAAGCTGAATATATAGAAAGTGCTTTGAATAAATTACATTTGATGAAAGAATGCTGCTATGATCCTGTTCAATGGTTGGAGAAACAATATCAACGATACTCGAAAAATAGTTCACTTCCATTATCTAGTACCATTTCATTAGATAATGGTTTGGTGTATGTTCATAGAGTACAAGTAACTCCATCCAAAGTATATTTTTGTGGTCCCGAAGTGAATCTTTCGAATCGAGTTTTGCGCAACTTTCCTAAAGACACCGATAACTTCCTTCGTGTTTCTTTTGTTGATGAAAACATGGATAAACTCCGTTCGTCTGATTTTTTGTCGCGATCCTCTTGTATAGAAGTGGACAGAGAAACAAAGGTTCATAAAAGAGTACTGTCTACACTAAAAAACGGCATAGAAATCGGTGACAAGAAGTTCGAGTTTCTTGCTTTCTCATCAAGTCAACTACGTGATAACTCGGCATGGATGTTTGCATCAAGAAAAGGCCTAACCGCCTGTGATATAAGAAAATGGATGGGAGACTTTAATGAAATTAGGAATGTGGCAAAATATGCAGCAAGGCTTGGTCAATCATTCAGCTCTTCAAGGGAAACGGTTAGTGTTGAAAGACACGAAATCGAAATCATTCCTGATATAGAATTGATAAGAGGTGAAAGCAAATATTGTTTCTCTGATGGAATAGGGAAGATATCTTATGAATTGGCTCAAGAAGTTGCTAAAAAATGTGGCTGCAAAGATCATATTATTCCATCTGCCTTTCAAATAAGATACGGTGGTTACAAAGGCGTTGTTGCTATTGATCCTAATTCATCAACTAAGCTTTCATTGAGAAATAGCATGTGCAAGTTTAAGTCAGAAAACACAAAATTAGATGTATTGTCATGGAGCAAAAACAAACCGTGCTTTCTTAACCGTCAAGTAATCGTTCTGTTGTCCACGCTCGGTGTCAAGGATAGAGTCTTTACAAGGATGCAAAGGGAGATTGTTAATAAACTCAAAATGATATCAAGAAAACCATTCATTGCATTAGACATGATGTCACAAGGAGAGATTACAAACATGTTAAGAGAAATGCTTATTGGTGGATTCCATCCGAAAAATGAACCTTTTCTTTCCATGATGTTGAAAACAATATGTGCATCAAAGTTACAAGAATTGCAGCTCAAAACAAGGATATTTGTTAGGAAAGGAAGAGCAATGTTAGGATGCTTGGATGAAACTAGGACTTTAAAATATGGAGAGGTATTTGTCCAAACATCTCTTTCTTCTAAGGGCATTGGAGCAAAACAAGGAAAATATATTGTTAAAGGGAAGGTAGTTGTAGCAAAGAATCCATGTCTACATCCAGGAGATGTAAGGGTTTTGAGAGCAGTTGATGTACCTTCCTTACATCATATGGTAGATTGTGTTGTTTTCCCACAGAAAGGGAGAAGACCACATCCTAATGAATGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTCTGTTGGGACCCTGCTCTTATTCCTCCTCATCAAGAAAGTCCAATGGATCATTCACCCTCTAAAGTCATGAATGTGGCTCATGATGTCACTTTACAGGATGTAGAGGAACATTTCACTCACTACATTGTTAAAGACACCTTAGGAATTATTGCAACTGCACACACTGTGTTTGCTGATAAGGATCCAGAAAAGGCAATGAGCCTTTCATGCATAGAGCTTGCAAAACTACACTCAATTGCCGTCGATTTTGCAAAATCCGGTGTCCCAGCCGAAATACCACAACATCTACAAGTGGATAAGTATCCAGATTTCATGGAAAAGCAAAACAAACCAACTTATCAATCAAACAACATAATCGGAAAACTTTACCGCGAGGTTAAGAATGTCGCACAACATAATAGCCACAAAAGATCATTCACTAGAAAAACAGCATTGAAGTTATATGATCATGACATGGAAATTGATGGTTTTGAAAAATTCACAAAAATTGCTTGTGAATACAAACACATGTATGATACCAAGTTGTTGAACTTAATGGATTATTATGGTATAGAAACAGAAGCTGAAATAATTAGTGGAAATATCTTAAAGATGTCAAAATCTTTTAATGATAGAAAAGATGAAGAAGGAATAAATCATGCTATGATTTCATTAAGGAATGAAGCTAGAGATTGGTTCAATGAGATGATAAGAAAATCAAATTCTCAATATGGTGATGATGATGATGATTCTTATGCCATAGCTTCTGCTTGGTATTATGTAACATATCATCCTAGTTATTGGGGATGCTATAATGAGGGACTAAATAAGGATCATTTCCTAAGTTTTCCATGGTGTGTTTATGATATTCTCATTCAAATAAAGAAGGACAAAGCCAATAGTAGAACTTATGATATGAAGGTTTGGACAACATTTAATATGTTTCTCATCATATTAATGTTTTGCATCTTATTGTGGATAATATATAGTGCATTATCATAA 3387 0.3555 MCKTIQIHGFPSNVSAEEVTKFLEQHAGFQTVLAVKIEQHKDEDSMAHVKVQFTDKKSVETILNMVTNKHLSYINYVLNATLIKPDILSKPRIFAYNMDGIGIHFGCQTSKRKLSVLWEHSNASVKFGARLRKMYIFFRYLSKDYKMQINSESISRIELHHSHCRTKKLLLFQLRSAPRIYEKEVSEIKYFKEAYDNHWFRSVDFTSSGCIGQSSALCFKLPQSTELPNFRHHFRNYYKFDDTFDLEKQPGFPSKFDFVPMVIPPEGFTLPYKFLFKINSLVQHGCLPLQAIDTDLFHMVDPKRIKAEYIESALNKLHLMKECCYDPVQWLEKQYQRYSKNSSLPLSSTISLDNGLVYVHRVQVTPSKVYFCGPEVNLSNRVLRNFPKDTDNFLRVSFVDENMDKLRSSDFLSRSSCIEVDRETKVHKRVLSTLKNGIEIGDKKFEFLAFSSSQLRDNSAWMFASRKGLTACDIRKWMGDFNEIRNVAKYAARLGQSFSSSRETVSVERHEIEIIPDIELIRGESKYCFSDGIGKISYELAQEVAKKCGCKDHIIPSAFQIRYGGYKGVVAIDPNSSTKLSLRNSMCKFKSENTKLDVLSWSKNKPCFLNRQVIVLLSTLGVKDRVFTRMQREIVNKLKMISRKPFIALDMMSQGEITNMLREMLIGGFHPKNEPFLSMMLKTICASKLQELQLKTRIFVRKGRAMLGCLDETRTLKYGEVFVQTSLSSKGIGAKQGKYIVKGKVVVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPALIPPHQESPMDHSPSKVMNVAHDVTLQDVEEHFTHYIVKDTLGIIATAHTVFADKDPEKAMSLSCIELAKLHSIAVDFAKSGVPAEIPQHLQVDKYPDFMEKQNKPTYQSNNIIGKLYREVKNVAQHNSHKRSFTRKTALKLYDHDMEIDGFEKFTKIACEYKHMYDTKLLNLMDYYGIETEAEIISGNILKMSKSFNDRKDEEGINHAMISLRNEARDWFNEMIRKSNSQYGDDDDDSYAIASAWYYVTYHPSYWGCYNEGLNKDHFLSFPWCVYDILIQIKKDKANSRTYDMKVWTTFNMFLIILMFCILLWIIYSALS* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2961 1128 Pfam RNA dependent RNA polymerase 364 928 IPR007855 GO:0003968
Tpr1g2961 1128 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1118 - -
Tpr1g2961 1128 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1118 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2961 Tpr-Chr1 33980257 33989090 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2961 1 33980257 33989090 Tpr1g2961 1 33980257 33989090 ECH