Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2952 ATGATAATAATCAGATCAAGAAATTTGAAACGGAAGCTTCCACAGGAAGCACCATTGCACACCGTTAGCAAGAAACTCCGGTCAAAAATTCCTCGCCGGAGAAGACGTCAGATCTCACCGGTGCTTGTTGTTTCACCGAGATTCAAAGTTTATGGAGAGAATCGGAATTTATCTGTTATTTCAGTTGATTCGAGTTCGAGCTCTGGTTCCGATTTTGCCGGCGGCGAAGTTTCAGTTTCGTGTGATTCGAGTAGGATTTCTACTGCTTTGTCCGGTAAAGGAAGAACAAGATCGATAAATGAGATTTCAAGCGGAATTGGAAGTGTTCGGAAGGGAGAATGTGTGAGTTTGTTGAGGAATCGGAGATTTGAGAAGCGGAATGAAAACGAAATGGAAGTTTCGGAGAATTCGTGTGTGGATTCTAATTCTGGAGTTCGTGATCGGAGTAGAAGCTTGATTTTGAAGTTTAAGAGTGGAAAAGAGAACGATGAAGTTTCGGAAGTTACTTTTGCGGAGAATTCAAAATCGAGTAACGGTAATTTGAATATCTCGTCGGAGATAACACGAAACGATGTCGTTTCGGTTAGTTCTGGTGCTCGAGAAACTTCGTCTATGGAGGAGAAGAGTAAAATCATGGAAAACAGAGCATCGGAATCTGAATTCTCGCAAATTTCGAGAAACCGTAACGCTGATGAGAATTGTACTGATTTGATAGCGCAATCAATTATGAAGAATTGTTCGGATAATTCAGGTTACGATTCCGATCTAGCTTGCTCTGAGGAATTCAACGAAGATGATGATTCAGAGTATTATTCAAGTCAGGCAACTACATTCTCTGATCTTCACTCCGAGATTTTTGGCGATTGTTCCGATTACAGTCCGTCTCAGTTCCTTGATTCCAGTAGCCAGTTTTCGCAGGGATCCGTTGGTGAAACTCCTTCACATACTTATTCATTGTTCCTTCAATACCGCGATGAATTCATGATGTTAAGTTCTCCGGTTAATAAGTCTTCAAGTGTTGAAGAAGATATTTCTCTTCAACTCAATTTTTCAAAGTTTGAAGACTTGGATGATGAAGACAGTTACCAGATGCTTAGAAAGAGAGAACGGAGACAAGTTTTCATGTGGAATTATGCTGAAAGATATTTCTCTACAACGAAATTCACCGACCTTGTGTTTCAGCAACGCTCAAAAATGGTTCACTGGATCATTGAGCAATCTTATCGGAAACATCTTCGACAAGAGACAATGTTTCTTGGAATCAACCTACTTGACCGTTTCCTGAGCAAGGGATACTTCAAAGCTGAGAGAAACCTTCAAATTGTTGGAATAGCCTGTCTTACATTGGCAACTAGAATTGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAGAATTTCTACATAGAAAAAAGTGCGTACAGTAGATGCGAAGTGGTGGCTATGGAATGGATGGTGCAGGAGGTGCTCGAGTTCGAGTGTTTTCATCCAACCATCTACAATTTCTTGAGCTTCTACCTAAAAGCTGCTAATGCTGATGCTGTTGTGGAGAAAAGGGTCACATGCCTAGCATTGCTGGCTCTGGCAGGTCCTGCTCAGCTGTGTTACTGGCCCTCAACTATTGCCGCTGCAGTTGTAATCCTGGCTTGTCTAGAATTCAATCAGAAAGCATCCCACAAAGTCATAGGGATCCACATTAGATCAAAGGATGAGAATCTGCACGATTGCATGGAGAGTCTGGAATGGTTGTTACGTTACCTATGA 1764 0.4155 MIIIRSRNLKRKLPQEAPLHTVSKKLRSKIPRRRRRQISPVLVVSPRFKVYGENRNLSVISVDSSSSSGSDFAGGEVSVSCDSSRISTALSGKGRTRSINEISSGIGSVRKGECVSLLRNRRFEKRNENEMEVSENSCVDSNSGVRDRSRSLILKFKSGKENDEVSEVTFAENSKSSNGNLNISSEITRNDVVSVSSGARETSSMEEKSKIMENRASESEFSQISRNRNADENCTDLIAQSIMKNCSDNSGYDSDLACSEEFNEDDDSEYYSSQATTFSDLHSEIFGDCSDYSPSQFLDSSSQFSQGSVGETPSHTYSLFLQYRDEFMMLSSPVNKSSSVEEDISLQLNFSKFEDLDDEDSYQMLRKRERRQVFMWNYAERYFSTTKFTDLVFQQRSKMVHWIIEQSYRKHLRQETMFLGINLLDRFLSKGYFKAERNLQIVGIACLTLATRIEENQQYNRVGQKNFYIEKSAYSRCEVVAMEWMVQEVLEFECFHPTIYNFLSFYLKAANADAVVEKRVTCLALLALAGPAQLCYWPSTIAAAVVILACLEFNQKASHKVIGIHIRSKDENLHDCMESLEWLLRYL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2952 587 Gene3D - 490 587 - -
Tpr1g2952 587 Gene3D - 375 489 - -
Tpr1g2952 587 SMART cyclin_7 401 488 IPR013763 -
Tpr1g2952 587 SUPERFAMILY Cyclin-like 497 584 IPR036915 -
Tpr1g2952 587 Pfam Cyclin, N-terminal domain 381 493 IPR006671 -
Tpr1g2952 587 ProSitePatterns Cyclins signature. 396 427 IPR006671 -
Tpr1g2952 587 PANTHER CYCLIN-SDS 4 578 - -
Tpr1g2952 587 MobiDBLite consensus disorder prediction 194 225 - -
Tpr1g2952 587 PANTHER CYCLINS 4 578 IPR039361 -
Tpr1g2952 587 Pfam Cyclin, C-terminal domain 497 581 IPR004367 -
Tpr1g2952 587 SUPERFAMILY Cyclin-like 356 493 IPR036915 -
Tpr1g2952 587 CDD CYCLIN 396 455 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2952 Tpr-Chr1 33881873 33886138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2952 390 549 Core Cell Cycle Gene Families AT1G20610 35.625 9.61e-19 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2952 1 33881873 33886138 Tpr1g2952 1 33881873 33886138 ECH