Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2951 ATGTCGATATCAGTGGACCATAATGATCAAAGAGCTGAAGCGATTCCCTGCTCCACAGCTACACCAAATTGGACTGTTCATGTTTCAGATATAAGAACGGTTAAGGTGAGTAACATATCACAGATTACTTCGAAAAAGGATATTGAAGAATTCTTTTCATTCTCAGGCGATATTCAATTTATTGAGATGCAAAGGGAATCTGATCGCACTCAGATTGCTTATGTTACCTTCAAAGATTCACAGGGAGCAGAAATGGCAGTTCTCTTGACGGGTTCTAAGATAGCTGACCTATATGTCACAATCTCACCTGTGGAGAAGTACCAGCTTCCCCCTGATGCGCTTCCCTCGAGTCCAACAAACAAAAGTGCTGCTGCAGTTAAGAAGGCTGAAGATGTAATTAGTACTATGCTTGCCAAGGGTTTCATTTTAGGAAAGGATGCGATCAACAAGACAAAATCCTTCGATGAACGTCTTCAATTGACTTCAAATGCTTCTTCCGCAGTTGCATCTATTGATAATAAAATAGGTTTAAGTGATAAACTAAGTATTGGAACAACCATTGTCAACGAAAAGGTGAAAGAGATGGATGAAAGGTATCAACTTTCTGGAATGACAAAATCTGCTATTGCTGTTGCCGAGCAAAAAGCAAGTAGTGCTGGATCCATTATCATGAGTAATTCTTACGTCTTAACCGGAGCTTCATGGTTTTCAAGTGCATATAGCGCTATTGCTAAGGCAGCTGAGGATGTCAGCTTGATGACCAAGGAGAAGCTTGAACAAGCTGAGGTGGACAAAAAGGAGATTATTTATAGTGAAAGAATAGGGATGGTCGATGGATATTCTCAGATGCACTTCGAAGACTCTTTAAACGGCGGGCCTGCAGTAGTTCCAGTTAATTCTGACAATGACAGTAAATCTGGTAATTTTTTAACTTGA 936 0.4017 MSISVDHNDQRAEAIPCSTATPNWTVHVSDIRTVKVSNISQITSKKDIEEFFSFSGDIQFIEMQRESDRTQIAYVTFKDSQGAEMAVLLTGSKIADLYVTISPVEKYQLPPDALPSSPTNKSAAAVKKAEDVISTMLAKGFILGKDAINKTKSFDERLQLTSNASSAVASIDNKIGLSDKLSIGTTIVNEKVKEMDERYQLSGMTKSAIAVAEQKASSAGSIIMSNSYVLTGASWFSSAYSAIAKAAEDVSLMTKEKLEQAEVDKKEIIYSERIGMVDGYSQMHFEDSLNGGPAVVPVNSDNDSKSGNFLT* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2951 311 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 10 306 - -
Tpr1g2951 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 95 IPR000504 GO:0003723
Tpr1g2951 311 Gene3D - 28 102 IPR012677 -
Tpr1g2951 311 SUPERFAMILY RNA-binding domain, RBD 25 106 IPR035979 GO:0003676
Tpr1g2951 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 10 306 - -
Tpr1g2951 311 SMART rrm1_1 33 102 IPR000504 GO:0003723
Tpr1g2951 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr1g2951 Tpr-Chr1 33876846 33880670 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2951 1 33876846 33880670 Tpr1g2951 1 33876846 33880670 ECH