Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2931 ATGGGAAAGGGTCAGCTGAGATTGTTCTTGTTCTTGTTCATGTTCTGTTCTTTTCTTTTTCTTGTTCTTTCTTCTTCTGTGTCACCCAGAAATTTTCCCATTATACCCTTTGATGAAGGGTATACACCTTTATTTGGAGACCATAACTTGATCATTCACTCTGATGCCAAAACTGTTCATCTCTCACTTGATGAGTCTTCAGGCTCTGGATTTGCTTCTCATGATCTTTACCTTCATGGGTATTTCAGTGCTTCCATTAAATTACCTTCTGATTACACTGCTGGTGTTGTTGTTGCATTCTATTTGTCAAATGGTGACATGTATGAGAAGAACCATGATGAAATAGACTTTGAATTTTTGGGACACATTAGAGGCAAAGATTGGAAGGTTCAAACCAATATTTATGGAAATGGAAGTACAAACATTGGAAGAGAAGAAAGATATAATCTATGGTTTGATCCTTCTGAGGATTTTCATCAGTACAGTATTCTATGGACAGATTCTAAGATTATATTTTATGTGGATGATGTTCCTATAAGAGAAATAAAGAGAACAAAATCAATGGGAGGAGATTTTCCATCAAAGGCAATGACATTGTATTCTACCATTTGGGATGCATCTAATTGGGCTACCAATGGAGGAAAATACAAAGTAAACTACAAATATGCACCCTATGTTGCTGAGTTTTCTGATTTTGTCCTACATGGTTGTGCAGTTGATCCTATTGATCATGTGACAAACTGTGACAGTGTTCAAAGTTCTGAAACAGTTCCTTCTGATGTAACACAACTAGAAAGAATCAAAATGGAGAACTTTAGGTTAAAGCACATGACATATTCTTACTGTTATGACAAAATTAGATACAAAGTTCCTCTACCAGAGTGTGTGATCGATTTGCGAGAAGCTGAAAGGTTGAGAAAATTTGATCCTGTTACGTTTGGTAATGGCCATCACCGCCGTGGAAAGCGACACCACATCAAGGAAGAAGCTGCTTCATTTTAG 1002 0.3683 MGKGQLRLFLFLFMFCSFLFLVLSSSVSPRNFPIIPFDEGYTPLFGDHNLIIHSDAKTVHLSLDESSGSGFASHDLYLHGYFSASIKLPSDYTAGVVVAFYLSNGDMYEKNHDEIDFEFLGHIRGKDWKVQTNIYGNGSTNIGREERYNLWFDPSEDFHQYSILWTDSKIIFYVDDVPIREIKRTKSMGGDFPSKAMTLYSTIWDASNWATNGGKYKVNYKYAPYVAEFSDFVLHGCAVDPIDHVTNCDSVQSSETVPSDVTQLERIKMENFRLKHMTYSYCYDKIRYKVPLPECVIDLREAERLRKFDPVTFGNGHHRRGKRHHIKEEAASF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2931 333 PIRSF EndGlu_transf 3 299 IPR016455 GO:0010411|GO:0016762|GO:0042546
Tpr1g2931 333 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 12 315 IPR044791 GO:0004553
Tpr1g2931 333 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 298 IPR013320 -
Tpr1g2931 333 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 28 229 IPR000757 GO:0004553|GO:0005975
Tpr1g2931 333 CDD GH16_XET 35 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Tpr1g2931 333 Pfam Glycosyl hydrolases family 16 39 221 IPR000757 GO:0004553|GO:0005975
Tpr1g2931 333 Gene3D - 24 295 - -
Tpr1g2931 333 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 12 315 - -
Tpr1g2931 333 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 260 295 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2931 Tpr-Chr1 33686143 33689631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2931 9 322 Glycoside Hydrolase AT1G14720 66.877 2.86e-163 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2931 1 33686143 33689631 Tpr1g2931 1 33686143 33689631 ECH