Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2930 ATGGCTGCAACATTCGTTTCTCGAATCTCTCTTCTTCAACCAAACCCATCTCTTTCTCTCAAACCCCATCAATCTCCTCTCTTTCCTCAACAATTTCCCTCAAGTTTTCGTTTTGAGACGAAAAGGGCAAAAGGGGTTGTGCTGAAAGCTTCTTCTGGTGTATTGGAAGTGAATTCGAAGCAACCCATTTCAGCTAAAAAATCTAATGATCCAATTATTGTTATTGATAACTATGATAGTTTTACCTATAATCTTTGTCAGTATATGGGAGAGTTAGGATTTCACTTTGAGGTCTACCGAAATGACGAGTTAACAGTGGAGGAGTTGAAAAGAAAAAATCCGAGAGGAGTGCTGATATCACCTGGGCCAGGAGAGCCTCAAGATTCAGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCTGTGTTTGGTGTGTGCATGGGATTGCAGTGCATGGGAGAGGCTTTCGGCGGGAAAATTGTTCGCGCTCCTTATGGTGTGATGCATGGAAAAAGTTCTCTGGTTTATTATGACGAAAAAGGAGAAGATGGATTATTTGCTGGACTACCTAATCCTTTCTTGGCTGCAAGATATCACAGCCTTGTAATTGAAAAGGAGAGCTTTCCTCATGAAGAACTTGAGGTAACAGCATGGACTGAAGATGGTCTCATAATGGCCATTCGCCACAAGAAATATCGGTATATGCAGGGTGTGCAATTTCATCCAGAGAGCATTATAACCCCTGACGGCAAGAAAATCGTCCACAACTTTGTGAAGCTTATAGAGAAAAAGGAAGCTGGTGGTTCTTGA 819 0.4188 MAATFVSRISLLQPNPSLSLKPHQSPLFPQQFPSSFRFETKRAKGVVLKASSGVLEVNSKQPISAKKSNDPIIVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPVFGVCMGLQCMGEAFGGKIVRAPYGVMHGKSSLVYYDEKGEDGLFAGLPNPFLAARYHSLVIEKESFPHEELEVTAWTEDGLIMAIRHKKYRYMQGVQFHPESIITPDGKKIVHNFVKLIEKKEAGGS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2930 272 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 49 269 - -
Tpr1g2930 272 SUPERFAMILY Class I glutamine amidotransferase-like 72 266 IPR029062 -
Tpr1g2930 272 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 72 262 IPR006221 -
Tpr1g2930 272 Gene3D - 70 263 IPR029062 -
Tpr1g2930 272 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 114 128 - -
Tpr1g2930 272 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 144 160 - -
Tpr1g2930 272 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 71 270 - -
Tpr1g2930 272 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 49 269 - -
Tpr1g2930 272 CDD GATase1_Anthranilate_Synthase 72 261 IPR006221 -
Tpr1g2930 272 Pfam Glutamine amidotransferase class-I 74 261 IPR017926 -
Tpr1g2930 272 PRINTS Anthranilate synthase component II signature 72 86 - -
Tpr1g2930 272 PRINTS Anthranilate synthase component II signature 117 126 - -
Tpr1g2930 272 PRINTS Anthranilate synthase component II signature 144 155 - -
Tpr1g2930 272 PRINTS Anthranilate synthase component II signature 170 178 - -
Tpr1g2930 272 PRINTS Anthranilate synthase component II signature 193 205 - -
Tpr1g2930 272 PRINTS Anthranilate synthase component II signature 240 253 - -
Tpr1g2930 272 PRINTS Glutamine amidotransferase superfamily signature 117 126 - -
Tpr1g2930 272 PRINTS Glutamine amidotransferase superfamily signature 144 155 - -
Tpr1g2930 272 PRINTS Glutamine amidotransferase superfamily signature 240 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2930 Tpr-Chr1 33679947 33683494 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2930 1 33679947 33683494 Tpr1g2930 1 33679947 33683494 ECH