Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2929 ATGGCAATGCCAATGGGAAATGCAGTTACGCCGGAGATTAAGCATTTTCCGGCAGTGGTTACTGGCGGTGAGATACAGTACAGACCACAACAACAACAACAACCACAACCACAACAATGGTTTGTTGATGAGAGAGATGGGTTTATGAATTGGCTTCGTAGCGAATTCGCAGCTGCGAATGCGATTATTGATTGTCTTGTTCAGCATTTACGTGTTGTTGGTGAAGGTGGTGAGTATGATTTTGTTGTTGGTGCAATTGAGCAGAGGAGAGTTAATTGGAATCAAGTGCTTCTTATGCAGCAGTATTTTTCGGTTTCTGAGGTGGGGTATGCTTTACAGCAAGTGGCGTGGAGGAGGCAACAGAAGTTTGCGAAACCGGTTGTTAAGGAGTTTAGGAAGGTTAGACAATGGCAGAGGTTTGAGGGTGGTGGTAATGTTAAGGAAGGTAGTAATTCTAGTGTTGAATCTCGTCGTGGTGAAGTGAATTATGCAGTTAAAGGGTCTCAGGTAGTTGATAAGAGTGAAGAATATAAATCTGGTGGCAAAGTTGGAAGTAAGGATGATAAGAGTTCAGAAAGTGTTGAGGTGAAGAAAGATACTATAACAAATCATCAATCTGATGGCATTTTGAAGACCTCTGTTAATTCTCAAGGATCTCTGTCCAGCGCAGAATGTAAAGCTGTGGGTGTAAATGCAGAATCGGCATCAAAGTCTGGAGAAAATGGTTCACTTTCTATGCAAAATCAACATAAGAACGAGAATGGTTCTACCACAGGAAAAACTTTTATTAGCAATGAGATGGTTGATGGAAAGATGGTTAATGTGGTGGAAGGACTGAAGTTGTATGAGAATTTACTGGATAGTACTGAAGTTTCAAAACTTGTTTCATTGGCCAATGATTTGAGGGTTGCTGGAAGAAAAGGACAATTGCAAGGTAGTCAGACATATGTGGCTTCTAAAAGGCCCATGAGAGGGCATGGAAGGGAGATGATTCAATTGGGTGTTCCCGTTGCTGATGCACCACCAGATGTGGACAATATGACTGCATCATTCAAAGATAAGAATTTCGAATCTATTCCTTCCTTGTTTCAAGATATCGTTGAGCGCATGGCTGCCTCAAAAGTGATGACTGTGAAGCCTGATGCGTGCATTGTGGATTTCTATAACGAGGGTGATCACTCAACGCCAAACAGTTGGCCGTCTTGGTTTGGAAGGCCTATTTATACGCTTTTCCTGACTGAATGTGACATGACTTTCGGTAGAACAATTGTCTCAGAACACCATGGGGATTTTAGGGGCAATGTCAAGCTTTCTCTTGTACCTGGGTCCCTTCTAGTGATGCAAGGGAAGTCAGCTGATTTTGCTAAACATGCTATTCCTTCTATTCACAAACAACGCATACTTGTTACTTTTACAAAGTCTTTACCAAAAAAGTCCCTGCCAATTGATGCTCAAGGTTTTGTATCACCGGCAACATCACATTGGTCATCGTCAGCCACACCGAGCAGATCTCCGAATCATATCAATCATCGTCCATTAGCTCCTAAGCATTATTCCGCAGTTCCAGTAACTGGGGTACTGCCTGCTCCATCCCTACATGCTCCTCCTAATAGCATGCAGCCATTATTTGTGCCAGTGCCAGTTGCACCTCCCATGCAATTTGCTACACCTGTGCCGATCCCTACTGGCTCCACAGCATGGAACGCGGCTCCTCCAAGGCATCCTCCTCCTCCTCGAGTTGTCGTTCCCGGCACAGGAGTCTTCCTCCCTCCATCTGGCTCAGCTAATTCATCTCAGCACTTGCAAGGTACCTTAACTGAAGTGAACGTAGGCGTTGGTGGAACCCAAAACTCATCGATTAAGGAAAACGGGAAAACTAATCATAAAAATACTAATGGTTCACCAAACGGTAAAAAGGATGGAAATCTGCAAAGGCGAGAATGCAATGGAAATACAGATGGAACTGAAGTTGAACAAGCTATAGTGGAAGAAGGGGAAAACAATGGAGAAACTGTTGCAAGCCAATGA 2028 0.4359 MAMPMGNAVTPEIKHFPAVVTGGEIQYRPQQQQQPQPQQWFVDERDGFMNWLRSEFAAANAIIDCLVQHLRVVGEGGEYDFVVGAIEQRRVNWNQVLLMQQYFSVSEVGYALQQVAWRRQQKFAKPVVKEFRKVRQWQRFEGGGNVKEGSNSSVESRRGEVNYAVKGSQVVDKSEEYKSGGKVGSKDDKSSESVEVKKDTITNHQSDGILKTSVNSQGSLSSAECKAVGVNAESASKSGENGSLSMQNQHKNENGSTTGKTFISNEMVDGKMVNVVEGLKLYENLLDSTEVSKLVSLANDLRVAGRKGQLQGSQTYVASKRPMRGHGREMIQLGVPVADAPPDVDNMTASFKDKNFESIPSLFQDIVERMAASKVMTVKPDACIVDFYNEGDHSTPNSWPSWFGRPIYTLFLTECDMTFGRTIVSEHHGDFRGNVKLSLVPGSLLVMQGKSADFAKHAIPSIHKQRILVTFTKSLPKKSLPIDAQGFVSPATSHWSSSATPSRSPNHINHRPLAPKHYSAVPVTGVLPAPSLHAPPNSMQPLFVPVPVAPPMQFATPVPIPTGSTAWNAAPPRHPPPPRVVVPGTGVFLPPSGSANSSQHLQGTLTEVNVGVGGTQNSSIKENGKTNHKNTNGSPNGKKDGNLQRRECNGNTDGTEVEQAIVEEGENNGETVASQ* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2929 675 SUPERFAMILY Clavaminate synthase-like 269 471 - -
Tpr1g2929 675 MobiDBLite consensus disorder prediction 616 639 - -
Tpr1g2929 675 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 660 - -
Tpr1g2929 675 Pfam 2OG-Fe(II) oxygenase superfamily 339 465 IPR027450 -
Tpr1g2929 675 MobiDBLite consensus disorder prediction 234 260 - -
Tpr1g2929 675 Gene3D - 262 479 IPR037151 -
Tpr1g2929 675 MobiDBLite consensus disorder prediction 172 201 - -
Tpr1g2929 675 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 660 IPR044842 GO:0003729|GO:0006402|GO:0032451
Tpr1g2929 675 MobiDBLite consensus disorder prediction 616 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2929 Tpr-Chr1 33661146 33668491 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2929 1 33661146 33668491 Tpr1g2929 1 33661146 33668491 ECH