Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2913 ATGAGGCTATGGAAAAGTGCCTCAGGAGTTTTAAAAGATAGATATAGCATTTTGGTTGCAAAGCTTTCACCTTATGGACCATGTAAAAACCCTGATCTTGAAACCGTTATTATAAAAGCAACAAGCCATGATGAAGATTGCATGGATTATAAGAATGTTCAAAAAGTTTTTCAATGGCTAAGAATATCACCTTTGTACCTTAAACCACTTTTATGTGTACTTTCATTGAGAATGCAAAAGACACATAGTTGGGTTGTAGCACTTAAAGGTTTAATGTTAATTCATGGTATTTTTTGTTTTGAATTACCAAATGTCCAAAGAATGGGAAGGCTACCTTTTGATTTATCACATTTTAGCGACGGACATGTAAGTTCGGAAAAAGGTTGGGTTCTTAATGCCTTTGTTCGATCGTATTTCGCGTATTTGGATCAAAGGTCAGCAAATTTGAGGACGGAAACACAAAAATTACAAACCAAAAAGGGAAAGGAAATGGAAGAAATTCCGTTGATCGAAGAGTTGAAGAATTTGGAGGAGTTACAAAGATTGATTGATATGTTGTTACAAATTAAACCCAGGAATGAATTGAACATGAATATTACTCTTATTCTAGAAGCAATGGATTGTATCATGGACGAGATTTTGGAAGTTTATGGTAAATTTAGAAAAGAGGTTAATCGCGTGTTGGTACGAGTTTGTGACATGGGTGGAAAAGAAGAAGCAAATATTGGTCTTGATATTGTACGAAAAACTCAATTACAAGGTGAAAAATTAATTTCGTACTTCGATTTTTGTAAAGAAATTGGCGTTCTTAATCATTCGGGGTGCCCTAAAATTGTGAGGTTTAATGACGAAGAAATCGAAGAACTTAAAAGAATATTGAAAGGTGGAGACGAGAAAGCTATTGTGGTTAGAGATGATTCTAAGAAATTCGAGAATGGTTTGAAAACCGTGATTACGGATCAATGGGAGGTATTTCTTGATGATATTATTGTTGAGGTTGAACAAAAACAAGCTCCTAATGCTATATTAAGCATTCTTGATGCTAATAATCCTTTTTTGGATGAATCTTATAGCATTATACCTTATAATCCTGTTCAAAATTATGATTTTCCAGATCTAATTAGTTTGTAG 1131 0.336 MRLWKSASGVLKDRYSILVAKLSPYGPCKNPDLETVIIKATSHDEDCMDYKNVQKVFQWLRISPLYLKPLLCVLSLRMQKTHSWVVALKGLMLIHGIFCFELPNVQRMGRLPFDLSHFSDGHVSSEKGWVLNAFVRSYFAYLDQRSANLRTETQKLQTKKGKEMEEIPLIEELKNLEELQRLIDMLLQIKPRNELNMNITLILEAMDCIMDEILEVYGKFRKEVNRVLVRVCDMGGKEEANIGLDIVRKTQLQGEKLISYFDFCKEIGVLNHSGCPKIVRFNDEEIEELKRILKGGDEKAIVVRDDSKKFENGLKTVITDQWEVFLDDIIVEVEQKQAPNAILSILDANNPFLDESYSIIPYNPVQNYDFPDLISL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2913 376 Pfam ANTH domain 32 290 IPR011417 GO:0005543
Tpr1g2913 376 CDD ANTH_N_AP180_plant 33 146 - -
Tpr1g2913 376 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 335 IPR045192 GO:0048268|GO:0072583
Tpr1g2913 376 Gene3D ANTH domain 155 307 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tpr1g2913 376 PANTHER OS08G0467300 PROTEIN 1 335 - -
Tpr1g2913 376 SUPERFAMILY ENTH/VHS domain 32 148 IPR008942 -
Tpr1g2913 376 Gene3D - 4 153 IPR008942 -
Tpr1g2913 376 Coils Coil 169 189 - -
Tpr1g2913 376 SUPERFAMILY GAT-like domain 164 294 - -
Tpr1g2913 376 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2913 Tpr-Chr1 33476153 33477283 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2913 1 33476153 33477283 Tpr1g2913 1 33476153 33477283 ECH