Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0467 ATGTCGCAAACTAGCAAGTCTATGCACAAGCTGGGTTTCGATTCTCTTACCGCACGATTCCGTGATTCGGTGAGTTGTGAAGAGAACAGGCCCGATTTCAAACAGCTCGATCTAGGTTCGCCTGTTTCGCCATTGAAAATCTGCGGCGGAGGTAATGCCGGCAGCGGCGATGGAGCCGCCGCCACTTCCAGCTCTAGTTCGAGTTCCTCTGGTTCAGTTTCAGGTAGAAGCAATGTTCCCAAGTTGCCGAAAAGACCCGATGGAAAACCAAGCCACCATTCCGGTGAGCTCACTGGCCATTTCGACACCAGCCCGAATGCCTCCGACAGCCTCCGATCCGCTGCGTCTACGCGCAATTCCAAGCCCGGTCATCGAAGATCAGTTTCCGCCGGAGCTCCATTAATCTACTCCGGCGGAAGTTTCAGCAGTCCTACTGGCGGCAACGGTAATTGCTCGAACGGTGCAACTTCAGAGACCAGTTTGTTCCCAACCGGTAACATTTGCCCGACGGGGAAGATCCTCAAATCGGGTATGACCTCTCGAGCTTCCAATAGAACTGATGTGTTGGGTTCTGGAACAGCGAATTATGGCCATGGTAATATAATGCGTGGTGGTATTAAATTGAGTAATACTAGGCACGTTGTGGATGAGAATGTATCTGGGAATTCTCAGTTTGGAGGACTGTCGGGGGTTGTTAAGAGAGCAATGGGTAGTTCTGATCCAGAGGAAGTGAAGAAGACTGGAAATGACTTGTATAGAAGTGGTAATTTTGTGGAGGCTTTGTCATTGTATGATCGTGCTATTTCAATATCGCCGAACAATGCTGCTTACCGGAGTAACCGGGCAGCTGCGTTGACGGCATTGGGGCGGCTAGCTGAGGCGGCTAGGGAGTGTGAAGAGGCTGTGAAGTTGGACCCTAGTTATGGCAGGGCGCATCAGAGGCTGGCTTCTCTTTACCTGCGCTTTGGGCAGGTAGAAAATGCCAAGCGCCACCTCTATGTCCCTGGGCAACAGGTGGATCAATCTGAACTACAGAAGCTGAGGTTATTGGAGAAACATCTAAATCGATGTGCAGAGGCAAGAAAGATTGGCGATTGGAAGAGTGCACTTAGAGAATCAGATGCAGCCATTGCAGTCGGAGCAGATTTCTCACCTCAGCTTGTCGCTTGCAAAGCGGAAGCTTATTTAAAACTCCATCAACTTGAGGACTCTGAATCCAGCCTCTCAAACATTCACAAGTTGGAAGGTTGCCCTCCATCCTGCTCTCAAACCAAGTTCTTTGGTATGGTTGGCGAAGCCTATGTACCCTTTGTTCATGCGCAGGTTGAGATGGCCTTAGGAAGGTTTGAGAATGCAGTAGCATCAGCAGAAAAGGCTAGCCTTCTAGACTACCACAATGCAGAAGTTGGGAGGGTTATAAATACTGTGAAAATGGTGGCAAGAGCTCGTTCCCGGGGCAATGACCATTTTAGCTCAGGAAAATTCTCTGAAGCTTGTTCTGCCTATGGAGAAGGCCTCAAATATGACAGTTCCAACTACATTCTATACTGTAATAGAGCTGTTTGTTGGTCTAAACTTGAACTATGGGAAAAATCTGTTGAGGATTGCAACCAAGCTCTCAACATTCAACCAAATTACACCAAGGCCCTTTTCCGCAGGGCAGTGTCAAATGCAAAGCTTGAAAGATGGGCAGAAGTTGTGAAAGATTACGAGACATTAAAGCGGGAACTTCCCGGAGACAATGAAGTTGTTGAATCCCTTCGTAAGGCTCAACTAGCATTGCAAAATTCTCGCAGAGAAGACTATGCTGGGAAGCTTGAAGTTGAATCAGTCTCTTCATTAGATGGCTTTAAGGCTGTACTTGCTTCTACTGGTATTTCAGTTGTTCATTTCAAAGAAGCATCAAACGAACTATGTGAAGAAATGTCCCCATTCATCAATATGCTGTGCGTGAGGTACCCATCTGTCAAATTCATCAAGGTGGATGTGGAGGAGTGTCGAGCTATAGCAAAAGCTGAGGGAATAAGAAGTGTCCcaactttcaaaatttataaaaatggaAGGAAGGTGAAGGAGATGATTCGCCCGACGCATCAGTTCTTAGAGGAGTCAGTGAGAAACTCTAATTTTCTCTAG 2136 0.471 MSQTSKSMHKLGFDSLTARFRDSVSCEENRPDFKQLDLGSPVSPLKICGGGNAGSGDGAAATSSSSSSSSGSVSGRSNVPKLPKRPDGKPSHHSGELTGHFDTSPNASDSLRSAASTRNSKPGHRRSVSAGAPLIYSGGSFSSPTGGNGNCSNGATSETSLFPTGNICPTGKILKSGMTSRASNRTDVLGSGTANYGHGNIMRGGIKLSNTRHVVDENVSGNSQFGGLSGVVKRAMGSSDPEEVKKTGNDLYRSGNFVEALSLYDRAISISPNNAAYRSNRAAALTALGRLAEAARECEEAVKLDPSYGRAHQRLASLYLRFGQVENAKRHLYVPGQQVDQSELQKLRLLEKHLNRCAEARKIGDWKSALRESDAAIAVGADFSPQLVACKAEAYLKLHQLEDSESSLSNIHKLEGCPPSCSQTKFFGMVGEAYVPFVHAQVEMALGRFENAVASAEKASLLDYHNAEVGRVINTVKMVARARSRGNDHFSSGKFSEACSAYGEGLKYDSSNYILYCNRAVCWSKLELWEKSVEDCNQALNIQPNYTKALFRRAVSNAKLERWAEVVKDYETLKRELPGDNEVVESLRKAQLALQNSRREDYAGKLEVESVSSLDGFKAVLASTGISVVHFKEASNELCEEMSPFINMLCVRYPSVKFIKVDVEECRAIAKAEGIRSVPTFKIYKNGRKVKEMIRPTHQFLEESVRNSNFL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0467 711 MobiDBLite consensus disorder prediction 19 133 - -
Sto7g0467 711 Gene3D Tetratricopeptide repeat domain 239 600 IPR011990 GO:0005515
Sto7g0467 711 CDD TRX_family 617 702 - -
Sto7g0467 711 Pfam Thioredoxin 617 695 IPR013766 -
Sto7g0467 711 MobiDBLite consensus disorder prediction 97 124 - -
Sto7g0467 711 SUPERFAMILY TPR-like 351 469 IPR011990 GO:0005515
Sto7g0467 711 ProSiteProfiles TPR repeat profile. 241 274 IPR019734 GO:0005515
Sto7g0467 711 Gene3D Glutaredoxin 602 709 - -
Sto7g0467 711 Pfam Tetratricopeptide repeat 248 307 - -
Sto7g0467 711 SUPERFAMILY Thioredoxin-like 526 706 IPR036249 -
Sto7g0467 711 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 12 707 IPR044534 -
Sto7g0467 711 SUPERFAMILY TPR-like 242 332 IPR011990 GO:0005515
Sto7g0467 711 MobiDBLite consensus disorder prediction 57 77 - -
Sto7g0467 711 SMART tpr_5 275 308 IPR019734 GO:0005515
Sto7g0467 711 SMART tpr_5 513 546 IPR019734 GO:0005515
Sto7g0467 711 SMART tpr_5 479 512 IPR019734 GO:0005515
Sto7g0467 711 SMART tpr_5 433 466 IPR019734 GO:0005515
Sto7g0467 711 SMART tpr_5 547 580 IPR019734 GO:0005515
Sto7g0467 711 SMART tpr_5 241 274 IPR019734 GO:0005515
Sto7g0467 711 MobiDBLite consensus disorder prediction 82 96 - -
Sto7g0467 711 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL4 12 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0467 Sto-Chr7 3431466 3434500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0467 253 328 Glycosyltransferase AT3G04240 34.211 5.75e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2794 4 28792558 28795827 Sto7g0467 7 3431466 3434500 CCT
Sto7g0467 7 3431466 3434500 Sto7g0467 7 3431466 3434500 ECH