Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0178 ATGGCGAATCGGAACTTAGAAAAGATGGCTTCCATTGATGCTCAGCTCCGGCAGCTGGTTCCGGCTAAAGTGAGTGAAGATGACAAGCTGATTGAGTATGATGCTCTTCTTCTGGATCGCtttcttgatattcttcaggaCTTACATGGAGAGGATCTGAAGGAAACGGTTCAAGAAGTATATGAGCTGTCTGCTGAGTATGAAGGAAAGCATGACCCTCAAAAACTGGAGGAGCTTGGAAATGCTATAACCAGTTTGGATGCTGGGGACTCGATCGTTGTTTCAAAGTCCTTTTCCCATATGCTTAACTTGGCCAATTTGGCTGAGGAGGTCCAGATTGCTCACCGACGAAGAAACAAGCTCAAGAAAGGGGATTTTGCTGATGAGAACAATGCAACAACTGAATCTGACATTGAAGAAACACTCAAAAAACTTGTGGTGGAGATGAAAAAGTCCCCGCAAGAAGTTTTCGATGCACTGAAGAACCAGACTGTTGATTTGGTTCTCACTGCTCATCCTACTCAATCAGTCCGTAGATCTTTGCTTCAGAAACACGCAAGGATAAGGAATTGCTTAACTCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTCGATGAAGCCCTACAGCGGGAGATTCAAGCTGCCTTCCGTACAGATGAAATCAGGAGGACCCCACCGACACCACAAGATGAGATGAGAGCAGGAATGAGCTACTTCCATGAAACAATCTGTGCTCCACttattcaattttcttcttggatgggTGGTGACCGTGATGGAAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGCTTATTGGCTAGAATGATGGCAGCTAACTTGTATTATTCTCAGATAGAGGATCTTATGTTTGAGCTATCTATGTGGCGCTGCAATGATGAGCTACGTGTCCGTGCTGATGAACTTCACCTGTCTGCTAAGAAAGATACAGTTGCAAAACACTATATAGaattttggaaaaaaattccTGCAAACGAACCATATCGTGTGGTGTTGGGTGACGTAAGGGATAGGCTTTATCAGACTCGTGAGCGTTCTCGCCATTTGCTTGCTCATGGTCACTGTGACATTCCAGTGGAGGCAACTTTCACCAATGTTGAGCAGTTCTTGGAGCCACTTGAACTTTGTTACCGATCACTCTGTGCTTGTGGTGACCGGGCAATTGCTGATGGAACCCTTCTTGATTTCTTGAGGCAAGTCTCCACTTTTGGATTGTCACTAGTAAGGCTTGACATCAGGCAAGAGTCAGACCGCCATTCTGATGTGATGGATGCTATTACCAAACATTTAGATATTGGTTCCTACCATGAATGGTCTGAAGAAAAGCGACAGGAATGGCTTTTGTCTGAATTGAGTGGCAAGCGCCCACTGTTTGGACCTGATCTTCCCACAACCGAAGAAATCAGAGATGTTTTGGACACATTTCATGTCATAGCAGAGCTACCACCAGACAACTTTGGAGCATACATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCTGTCGAACTTCTGCAGCGAGAATGCCATATTAAGCACCCATTAAGAGTTGTCCCACTGTTTGAGAAGCTTGCTGATTTGGAGGCTGCACCGGCTGCTTTAGCCCGGTTGTTCTCAGTAGACTGGTACAAGAACCGGATCAATGGGAAGCAAGAAGTCATGATCGGCTATTCAGATTCAGGGAAAGATGCTGGAAGATTCTCTGCAGCATGGCAGCTATATAAGGCTCAGGAGGAACTTATAAATGTAGCCAAGGAATATGGTGTTAAGCTAACCATGTTTCACGGTCGAGGTGGGACTGTAGGGAGAGGAGGTGGCCCCACCCACCTTGCTATCCTGTCTCAACCCCCTGAGACAATTCATGGATCACTTCGTGTGACAGTCCAGGGAGAAGTTATTGAGCAATCATTTGGAGAGCAGCACTTGTGTTTCAGAACACTCCAGCGTTTCACTGCTGCCACTCTAGAACATGGAATGCATCCTCCAATTTCCCCAAAACCCGAATGGCGTGCCTTGATGGATGAGATGGCTATCATTGCCACAGAAGAATACCGTTCCGTTGTATTCAAAGAACCACGATTTGTCGAGTATTTCCGCCTGGCTACACCAGAGTTGGAGTATGGCCGGATGAACATTGGAAGCCGACCGGCAAAGAGAAGGCCAAGTGGGGGTATTGAAACACTCCGTGCAATACCTTGGATTTTTGCTTGGACTCAAACAAGGTTTCATCTTCCAGTGTGGCTTGGATTTGGGGCAGCATTCAAACATGTTATAGAGAAGGATGTGAGGAACCTGCAAATGCTACGAGAAATGTACAATCAATGGCCATTCTTTAGAGTCACCCTTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCAGGGATTGCAGCACTATATGATAAGCTGCTTGTTTCACCAGAACTGTGGCCATTTGGGGAACAGTTGAGAGCCAAGTATGAAGAAACTAAGAATCTCCTCCTTCAGGTGGCTGGGCACAAGGATCTTCTTGAAGCAGACCCATACTTGAAGCAAAGGCTCCGATTGCGTGATTCTTACATTACTACCCTAAATGTTTGCCAAGCCTACACATTGAAACGCATTCGTGATCCGAGCTATGATGTGAAGGAGCGCCCTCACTTGTCGAAAGAGCCTATGGAGATAAGTAAACCAGCTGATGAACTCGTAACGTTGAACCCGACAAGCGAATACGCCCCGGGATTAGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCTTGCAGAACACTGGTTAA 2826 0.4529 MANRNLEKMASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPQKLEELGNAITSLDAGDSIVVSKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFADENNATTESDIEETLKKLVVEMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHARIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETICAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELHLSAKKDTVAKHYIEFWKKIPANEPYRVVLGDVRDRLYQTRERSRHLLAHGHCDIPVEATFTNVEQFLEPLELCYRSLCACGDRAIADGTLLDFLRQVSTFGLSLVRLDIRQESDRHSDVMDAITKHLDIGSYHEWSEEKRQEWLLSELSGKRPLFGPDLPTTEEIRDVLDTFHVIAELPPDNFGAYIISMATAPSDVLAVELLQRECHIKHPLRVVPLFEKLADLEAAPAALARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELINVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDEMAIIATEEYRSVVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIEKDVRNLQMLREMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSPELWPFGEQLRAKYEETKNLLLQVAGHKDLLEADPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPSYDVKERPHLSKEPMEISKPADELVTLNPTSEYAPGLEDTLILTMKGIAAGLQNTG 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0178 941 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 941 IPR015813 GO:0003824
Sto7g0178 941 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Sto7g0178 941 Gene3D Phosphoenolpyruvate/pyruvate domain 282 419 - -
Sto7g0178 941 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 PRINTS Phosphoenolpyruvate carboxylase signature 416 436 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 PRINTS Phosphoenolpyruvate carboxylase signature 565 585 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 PRINTS Phosphoenolpyruvate carboxylase signature 607 636 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 PRINTS Phosphoenolpyruvate carboxylase signature 739 765 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 941 IPR022805 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 Coils Coil 104 124 - -
Sto7g0178 941 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 567 579 IPR033129 -
Sto7g0178 941 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 249 941 - -
Sto7g0178 941 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 247 - -
Sto7g0178 941 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 247 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 249 941 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 Pfam Phosphoenolpyruvate carboxylase 250 941 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto7g0178 941 Pfam Phosphoenolpyruvate carboxylase 35 248 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0178 Sto-Chr7 1336659 1341718 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0178 7 1336659 1341718 Sto4g2787 4 28749218 28749538 CCT
Sto7g0178 7 1336659 1341718 Sto7g0178 7 1336659 1341718 ECH