Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2580 ATGCCAATCTCTCCTCATCTCcctccttcttctttccttcttgTGTTGTTGTTCTTTTCATCATCGTCGACATCCATTATTGCAACAACCTCATCCTCCTCCTCCGCTTCCGCCGCGGATTCCTTCGTCTTCGGCGGCTGCTCGCAGCTCAAGTTCCCGCCGGCGTCGCCCTACGAGGCCAACGTGAACTCCCTCCTCACCTCCCTCCTCAACTCCGCCGCCTTCTCCAACTACAACAACTTCACCGTCCcggcctcctcctcctcctcgtcACAAGACACCCTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCGCCGCCGCCGAGTGCTCGCGCTGCGTCTCCCGGGCCGTGGCCCGGCTCGGCGCGCTCTGCCCCGGCGCGTGCGGCGGCGCGTTGCAGCTCCACGGCTGCTTCGTCAAGTACGACAACGCCACGTTCCTGGGAGTGGAGGATAAGGCGGAGGTGATGAGGAAATGCGGGCCGTCGATCGGGTTGACTTCCGATGCGTTGACTGCGAGGGATGCCGTGCTGGCGAATTTGGGAGCGTCGGATGGGGGGTTCAGGATTACGAGTTCTGGGGATGTGCAGGGTGTGGCGCAGTGCGTGGGGGATTTGAGTGCGGGCGAGTGTGGGGATTGCGTGTCGGATGCGATCCAACGGCTGAGGATGGAGTGTGGGGCCGGCGCGTGGGGGGAGATGTATCTGGCCAAATGCTACGCGCGGTACTTTCAGCGTGGATATCACTCGCCAACCGGAAATGATGATGATAGCAGCAGAAATGATGAAGAGGTTGAGAAAACACTTGCAATTCTACTTGGACTCATAGCTGGGGCGCACACAAAGTTCACTGTTAGATGA 861 0.5714 MPISPHLPPSSFLLVLLFFSSSSTSIIATTSSSSSASAADSFVFGGCSQLKFPPASPYEANVNSLLTSLLNSAAFSNYNNFTVPASSSSSSQDTLYGLFQCRGDLAAAECSRCVSRAVARLGALCPGACGGALQLHGCFVKYDNATFLGVEDKAEVMRKCGPSIGLTSDALTARDAVLANLGASDGGFRITSSGDVQGVAQCVGDLSAGECGDCVSDAIQRLRMECGAGAWGEMYLAKCYARYFQRGYHSPTGNDDDSSRNDEEVEKTLAILLGLIAGAHTKFTVR 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2580 286 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Sto6g2580 286 ProSiteProfiles Gnk2-homologous domain profile. 148 248 IPR002902 -
Sto6g2580 286 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 24 279 - -
Sto6g2580 286 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 24 279 - -
Sto6g2580 286 Pfam Salt stress response/antifungal 188 243 IPR002902 -
Sto6g2580 286 Pfam Salt stress response/antifungal 50 144 IPR002902 -
Sto6g2580 286 Gene3D - 166 247 IPR038408 -
Sto6g2580 286 Gene3D - 38 147 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2580 Sto-Chr6 32856846 32862320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2580 30 252 Pollen Coat Proteome AT4G20670 23.577 1.74e-12 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2580 6 32856846 32862320 Sto6g2580 6 32856846 32862320 ECH