Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2933 ATGGATCTTCTCTACGGAGCATACGGAAGAGCCTCTGATGACGATGAAGAAGAACCCAAACGTCAGAAGCTCGCACGCTCTTCCTCCAACGCCAACTCaccaaagccaaaaccctatcCTCCTCCACCTTCAAACCATTCCCTGCACCTCCAAACACAACCTTTGCTTCCATACATTTCCAAGCGACAAAGAGCGCTTTCAGGTGCTGCCCCCTCTATTCCTGACCCGGTTCCAGTATGCAATGCAATACATCTGATGACCTTGTTCTTGTTCTTAAGTTTAGGAAGTATATCAGATAGTGATCTACCTCCTAGCATTTTGTCATTGATGAGAAATAAAGGAAAGGGTCATCGAGATCTGAGCCTGATACCTGAAAGGCTATCTGTGCCTCTATATGGTCATACAAAAGCTGTCAATAGTATACAATGGTCTCCCACTTATGCTCATCTCCTTGCATCTGCTGGAATGGACCATATGGTTTGTGTTTGGAATGCGTGGAGCAGAAATCAGAAGAAAGCACGTGTGCTAAGCTTCCACAATGCAGCAGTGAAAGATGTAAAGTGGTCTCAGCTAGgacactttctactttcttgtGGTTATGATTGCACATCAAGGTTGGTTGATGTAGAAAAGGGGTTTGAGACTCAGGTTTTCAGTGAAGATCAAATTCTTGGAGTTCTAAAGTTCCATCCAgacaatccaaacctatttctTTCTGGTGGTTCAAAGGGCCATATTACACTATGGGATATCAGGACTGGTAAAGCAGCCCATAGCTTTTCTCGCAGTTTAGGTCCAATTCTAGATGTTGAGTTTACAAACAATGGGAAGCAATTCATTTCTTCTAGTGACGTATCTGGGAGCAATGTCAGTGAGAACTCTATTATTGTTTGGGATATGTCAAGACAAGTTCCTCTGTCTAATCAAGTTTACGTTGAAGCTTATACCTGTCCCTGTGTAAGGTGCCACCCATTTGAATCTACTTTCGTTGCCCAGTCAAATGGGAATTATATTGCAATGTTTTCTAGCACTCCACCTTTCAGACTAAACAAATATAAGAGGTACGAGAGCCACGGGGTCTCTGGGTTCCCAATTAAGTGCAATTTCAATTTGGACGGGAAAAGGCTTGCCTCCGGTTCTTCAGATGGTTGTATTTACCTTTTTGATTATCAATCATCTAAGGTTATTAAGAAAATCAAGGCCTATGACCAAGCATGTATAGACGTTGTTTTCCACCCTATTATACCTAATGCTATTGCCTCATGCTCCTGGGATGGAAGCATTTCGGTATTTGAATAG 1299 0.408 MDLLYGAYGRASDDDEEEPKRQKLARSSSNANSPKPKPYPPPPSNHSLHLQTQPLLPYISKRQRALSGAAPSIPDPVPVCNAIHLMTLFLFLSLGSISDSDLPPSILSLMRNKGKGHRDLSLIPERLSVPLYGHTKAVNSIQWSPTYAHLLASAGMDHMVCVWNAWSRNQKKARVLSFHNAAVKDVKWSQLGHFLLSCGYDCTSRLVDVEKGFETQVFSEDQILGVLKFHPDNPNLFLSGGSKGHITLWDIRTGKAAHSFSRSLGPILDVEFTNNGKQFISSSDVSGSNVSENSIIVWDMSRQVPLSNQVYVEAYTCPCVRCHPFESTFVAQSNGNYIAMFSSTPPFRLNKYKRYESHGVSGFPIKCNFNLDGKRLASGSSDGCIYLFDYQSSKVIKKIKAYDQACIDVVFHPIIPNAIASCSWDGSISVFE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2933 432 SMART WD40_4 392 432 IPR001680 GO:0005515
Sto4g2933 432 SMART WD40_4 169 208 IPR001680 GO:0005515
Sto4g2933 432 SMART WD40_4 350 389 IPR001680 GO:0005515
Sto4g2933 432 SMART WD40_4 253 299 IPR001680 GO:0005515
Sto4g2933 432 SMART WD40_4 124 164 IPR001680 GO:0005515
Sto4g2933 432 SMART WD40_4 211 250 IPR001680 GO:0005515
Sto4g2933 432 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 15 432 - -
Sto4g2933 432 SUPERFAMILY WD40 repeat-like 124 431 IPR036322 GO:0005515
Sto4g2933 432 Gene3D - 110 432 IPR015943 GO:0005515
Sto4g2933 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 131 164 - -
Sto4g2933 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 131 164 IPR001680 GO:0005515
Sto4g2933 432 MobiDBLite consensus disorder prediction 9 24 - -
Sto4g2933 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 217 259 IPR001680 GO:0005515
Sto4g2933 432 Pfam WD domain, G-beta repeat 173 206 IPR001680 GO:0005515
Sto4g2933 432 Pfam WD domain, G-beta repeat 131 164 IPR001680 GO:0005515
Sto4g2933 432 MobiDBLite consensus disorder prediction 1 50 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2933 207 413 Miscellaneous Gene Families AT5G08390 19.712 5.90e-06 47.0