Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0457 ATGGAGAGAGATTTCATGGGTTTAAGCTCGAAGGAATCACTATCTGTGGTGAAGGAGGAGATTAACAATGATGGATGCAAAGACTCGGGCTTCGCTAAGGGTTCAGTTGTACAATGGCCCTTCTCCAATAAAGTCTCTGCTCTTCCACATTTGATGTCCTTCAAGGTTTCTCAAGATGATAAGACTAAGAAGATGGTGTCTGATCCCATGACATCTTCTGGGTTTATGGCTATCTCAAGTCCAGATGCATTTGAGGCTACTCAAAGACGTTCTACTAGTGAAATCCAGAAACCTTTCAATCACGATGCGCAAGGTGGCTTTCATTTTTCCCTGACTCCGTATCCTGTACAACATGATGTGCATTCTCTGAATCGTCCTCATGATGTGAAGATGTTTTCAGTTCCCAATCAAGCAATTTCAGTTTCATTGGGGCACCCAATCATGAAGAACCATTTCATTGCTGCGGGTCAGAATATGGCAGTTGCTAATGTGAATGTGAAGCCACAGCTGCTTGGGGGTATACCTGTCACTTTGCCTCATCCAGTCACTCCCACTGTTGGCTCTGTTGCTGCAATGACTGAATCATGTAACAGTGTGAAGCCATCTGCACCTCCTGCTCAACTCACCATCTTCTATGCTGGTACTGTGAATGTCTTCGAAGATATCACCCCTGAGAAGGCACAAGCTATCATGTTGTTAGCTGGGAATGGATTATCCATGGCTTCTAACAAGCCGCAGCCAAATGTTCAAGCACCGAACTTGAAGTTGAGTGGAGGTGAAGTTATGCCTGTGAGTCAACCCATAAATACATCACCCTGCTCTGGACTTTCGAGTCCTTTATCTGTTTCCTCTCAGACTGGTGGTGCACAGTCAGGGAGTGGCTCAACAACTAGCACAGATGAGTTTCTGGTGGCTAAAACAACTGGAGTGCCCACCACTCCCGTTAGCAAAGGGGAGcctccaaaagttgtcaatgCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCACGCAAAGCTTCATTGGCCCGGTTTTTGGAGAAGCGTAAGGAAAGAGTGATGAATGCAGCACCATATAACCTGAACAAGAAATCTGAGGAGTGTGCCACTGCTGAATACAATGGTGCCAACTTCTCTGCAACTACTTCTCCTGCTGTTGCTAATATTTTATCAGCCAGGCAAGGATAG 1188 0.4529 MERDFMGLSSKESLSVVKEEINNDGCKDSGFAKGSVVQWPFSNKVSALPHLMSFKVSQDDKTKKMVSDPMTSSGFMAISSPDAFEATQRRSTSEIQKPFNHDAQGGFHFSLTPYPVQHDVHSLNRPHDVKMFSVPNQAISVSLGHPIMKNHFIAAGQNMAVANVNVKPQLLGGIPVTLPHPVTPTVGSVAAMTESCNSVKPSAPPAQLTIFYAGTVNVFEDITPEKAQAIMLLAGNGLSMASNKPQPNVQAPNLKLSGGEVMPVSQPINTSPCSGLSSPLSVSSQTGGAQSGSGSTTSTDEFLVAKTTGVPTTPVSKGEPPKVVNATAMLPSAVPQARKASLARFLEKRKERVMNAAPYNLNKKSEECATAEYNGANFSATTSPAVANILSARQG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0457 395 Pfam Jas motif 335 359 IPR018467 -
Sto11g0457 395 SMART tify_2 201 236 IPR010399 -
Sto11g0457 395 PANTHER PROTEIN TIFY 7 13 382 - -
Sto11g0457 395 Pfam tify domain 203 235 IPR010399 -
Sto11g0457 395 ProSiteProfiles Tify domain profile. 201 236 IPR010399 -
Sto11g0457 395 MobiDBLite consensus disorder prediction 265 301 - -
Sto11g0457 395 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 382 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0457 Sto-Chr11 5827898 5831070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0457 37 368 Tify Gene Family AT3G17860 35.965 5.06e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto11g0457 tify 1.5e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0457 11 5827898 5831070 Sto11g0457 11 5827898 5831070 ECH