Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0440 ATGTCGTGGGAAGACGAGATTGTGATGCGCGATGTCACAAGTGCGGGTCTCGTCGTCAGTGATCGCATTGGCCGAGAAGTTGCGTCGCAGCTCGACCTCGAAGAAGCCCTAGAAGCCTCCAGATACGCCAGTCATCCTTATTCCACCCACCCCAGAGAGTGGCCACCTTCAGTTGAGGTAGTTGATACTTGGGAGTTGCCTCCTGTGCTCATTGAGAGATACAATGCAGCTGGTGGGGAAGGAACTGCTTTATGTGGAATATTCCCTGAAATTCGTAGAGCATGGGCATCTGTGGACAATTCCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGGCAATGTCCTGAATATAGTGGGGAGGAACAAGCTATTTGTGCTGTTGGTCTTGCAAAATCAAAACCGGGAGTCTTCGTTGAAGCTATCCAATATCTTTTAGTTTTAGCAACACCCGTTGAGTTGATTTTAGTGGGAGTGTGCTGCTCTGGAGGAACTGATGGTTCAGATCCATTCTCTGAAGTTTCATTACAGCCTTTGCCAGAGTATACTGTGCCATCAGATGGGGTCACAATGACTTGTGTAGCATGTACCGATAAGGGTCGTATTTTCCTTGCTGGTCGTGATAGCCACATATATGAACTCCTTTATTCTACTGGTTCAGGCTGGCAAAAACGCTGTCGAAAAGTCTGCCTCACTGCTGGTTTGGGGAGCGTCATTTCAAGATGGGTTATACCAAATGTATTTAATTTTGGAGCTGTTGACCCCATTGTTGAGATGGTTTTTGATAATGAGAGGCAAATCTTGTATGCACGAACTGAAGAAATGAAGCTTCAGGTGTACGTACTAGGACCAAATGGTGATGGTCCCTTAAAGAAAGTGGCTGAAGAAAGGAACCTTGTCAGTCAGAGGGATGCACATTATGGAAGTAGACAATCAACTGGACCAAGAAACTCAAGTCGATCACCAAAGCCATCTATTGTTTGCATCTCACCTTTATCTACACTCGAGTCCAAGTGGTTACATCTTGTTGTTGTTTTATCAGATGGTAGAAGGATGTACCTATCTACCTCTCCTTCTAGTGGAAGCTTAAGTGGGTTCAACACTGACCATCATAAGCCAAGCTGTTTAAAAGTTGTCACAACAAGGCCTGCTCCTCCTTGGGGCGTAAGTGGTGGCCTTACCTTTGGAGCCATGTCTGTTGCTGTTAGACCTCAGAATGAAGATCTCTCACTGAAAGTTGAGTCAGCCTATTATTCTGCTGGAACTCTTATCCTTTCTGATGCATCCCCACCAAGCATGTCTTCACTTCTTGTTTTAAACAGAGATTCAAGCACACAGTCATCTTTGTCAGGTAATGTAGGGGCAAATACAAGGAGTTCTCGGGCATTACGGGAATGCGTATCCTCTTTACCAGTTGAAGGCCGAATGCTTTTTGTGGCAGATGTTTTACCCTTGCCAGATACCGCAGCTACTGTTCAGTCTCTATATACAGAAATAGAGTTTGGTGGATATGAGAGCTCAGTGGAATTTTGTGAAAGGGTTTCTGGTAAACTCTGGGCAAGGGGTGACCTCTCAACCCAACATATATTGCCAAGGAGGAGAATTGTCATCTTTAGCACTGTGGGCATGATGGAAATAGTCTTTAACAGGCCAGTGGACATTCTAAAGCGGTTGTTTGAGTCCAACTCTCCAAGATCTATATTAGAAGATTTCTTTAATCGTTTTGGTGCTGGTGAGGCAGCTGCAATGTGTCTAATGCTAGCTGCAAGAGTAGTGCCTTCTGAAAATCTTATTAACAATGTTGTTGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGAGTTGTTGGAATGCCACAACTTGAAGGTAGTAATGCATTATCAAACACAAGAACTGCAGCTGGTGGATTCAGCATGGGCCAGGTTGTTCATGAGGCTGAGCCCGTGTTTTCAGGTGCACATGAAGGACTCTGCTTGTGTTCATCTAGGTTACTTTTTCCTCTGTGGGAACTACCTGTAATGGTTGTAAAAGGCACTTTAGGTCCTTCAGGCACTTTGTCAGAAAGTGGGGTGGTTGTATGCAGACTCTCTGCCGGAGCTATGCAAGCCCTTGAACACAAAGTCCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTTGCAGGTTTGGGAGATCTGAGTGGTTCCATTCTTTATGGTAATGGTTCTGCATTAGGTGCTGGTGATCGGAGTATGGTAAGAAACTTATTTGGTGCATATTCCAGAAATATGGAGTCTAATGGTGGAACATCTAATAAAAGGCAAAGATTGCCGTACAGTCCTGCAGAATTGGCCGCCATGGAGGTGAGGGCAATGGAATGCATTAGGCAGTTGCTTCTTAGATCTGCCGAAGCTCTCTTTTTGCTCCAACTTCTTTCGCAGCATCATGTAACACGGTTGGTTCAGGGATTTGATGCTAGCCTGCAACAAGCACTAGTTCAATTAACTTTTAATCAACTAGTTTGTTCTGAGGAGGGTGATCGTCTTGCCACGAGACTTATATCTGCTCTAATGGAGTATTATACTGGTCCTGATGGCAGGGGGACTGTAGATGATATCAGTGGgagattaagagagggttgtcCGAGCTACTATAAAGAGTCTGATTACAAATTCTTCTTAGCTGTGGAAGCTTTGGAGAGAGCTGCTGTGACTCTGGATGCTGCGGAAAAGGAGAATCTTGCAAGGGAAGCATTCAATCTCTTAAGTAAAGTTCCGGAGTCTGCTGACTTACGAACTGTTTGCAAGcgttttgaggatttaagATTTTATGAAGCTGTGGTACGGTTACCTCTTCAAAAGGCACAAGCTCTGGATCCTGCAGGTGATGCGTACAATGATGAAATTGATGTAACTGTTAAAGAACAAGCACTTGCTCAGCGTGAACAATGTTATGAGATAATTATAAGTGCTTTGCGGTCTCTGAAAGGTGATTCTTCGCAGAAGGAATTTGGCTCTCCCATCAGATCTGCTTCTTCACAATCTGTTCTCGATCCATCCTCtcggaaaaaatatatatgccaGATTGTTCAGCTTGGTGTCCAATCACCAGATCGAATTTTCCACGAGTATTTATACCGGGCAATGATTGATTTGGGTCTTGAGAATGAGTTGTTAGAGTATGGAGGTCCTGATTTGTTGCCCTTTTTGCAAAGTGCAGGCCGTGAATCTATACAAGAGCTTCGTGCTGTGTCCGCAACAACTTCTCCGTTGGGGCAATCAGGAGCACCTATGTCGTCGAATCAAATCAAATACTATGAACTTTTGGCACGGTATTATGTAATGAAGCGGCAACATATGCTGGCTGCTCATGCATTGCTAAGACTGGCTGAGAGGCGCTTTATTGATGGAGTTCCTACTTTGGAACAAAGGTGTCAATACCTAAGTAATGCAGTTGTACAGGCAAAGAGTGCAAGTAATAGCAATGGCTTGGTTGGTTCTGGTCGGAGTTCCATGGATAGTGGATTCCTAGATTTGCTTGAAGGAAAGCTTGCTGTTCTTCGGTTTCAAATAAAAACCAAAGAGGAACTGGAGGCTTTAGTGTCCAGATCAGAGGTTTTACCTGCCACATCTGATTCTGCCCCAAATGGTTTAGTTCCTGAAAGGAGTTCAACTGCTGATGCTAATATTGCAAATGCGGCACGAGAGAAAGCCAAAGAGCTATCATCAGATGTGAAGAGTATAACACAACTATATAATGAATATGCTGTTCCTTTTGAGCTGTGGGAGATATGCCTGGAGATGCTGTACTTTGCCAATTATACTGGTGATGCTGACAGCAGTATTTTGAGAGAAACTTGGGCAAGACTTATTGATCAAGCTCTTTCAAGAGGTGGAATTGCTGAAGCTTGTTCAGTGCTGAAAAGGGTTGGTCCGCGCATTTATCCGGGTGATGGAGCTGTTATACCTCTAGACACGATCTGTCTTCATCTAGAGAAAGCTGCACTGGAGAGGTTGAGTTCAGGGGTTGAAACCGTCGGAGATGAAGATGTTGCAAGGGCACTTCTTTCGGCCTGTAAAGGTGCGGCTGAACCTGTGTTGAACACTTATGATCAATTGTTGTCAAATGGGGCTATTTTGCCATCACCAAACCTAAGACTACGTATGCTGAGATCAGTTCTAGTGGTGCTTCGTGAGTGGGCAATGTCTGTAGTTGCACAGAGGATTGGTACTAGTCCCACTGGGGCTTCCTTAATACTGAGTGGAGGATTCTCACTAGAGAGAACAGTTGTTAACCAAGGAGCTCGGGATAAGATCGCGAGTGCGGCAAACAGGTATATGACTGAAGTGAGGAGGCTAGCCCTTCCACAGAGCCAAACAGAAGCTGTTTACAGAGGTTTTAAAGAACTTGAAGAATCACTGATTAGTCCTTATTCTTTTGATCGCTTTTGA 4455 0.44 MSWEDEIVMRDVTSAGLVVSDRIGREVASQLDLEEALEASRYASHPYSTHPREWPPSVEVVDTWELPPVLIERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGTDGSDPFSEVSLQPLPEYTVPSDGVTMTCVACTDKGRIFLAGRDSHIYELLYSTGSGWQKRCRKVCLTAGLGSVISRWVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGPLKKVAEERNLVSQRDAHYGSRQSTGPRNSSRSPKPSIVCISPLSTLESKWLHLVVVLSDGRRMYLSTSPSSGSLSGFNTDHHKPSCLKVVTTRPAPPWGVSGGLTFGAMSVAVRPQNEDLSLKVESAYYSAGTLILSDASPPSMSSLLVLNRDSSTQSSLSGNVGANTRSSRALRECVSSLPVEGRMLFVADVLPLPDTAATVQSLYTEIEFGGYESSVEFCERVSGKLWARGDLSTQHILPRRRIVIFSTVGMMEIVFNRPVDILKRLFESNSPRSILEDFFNRFGAGEAAAMCLMLAARVVPSENLINNVVAEKAAEAFEDPRVVGMPQLEGSNALSNTRTAAGGFSMGQVVHEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGTLGPSGTLSESGVVVCRLSAGAMQALEHKVRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGNGSALGAGDRSMVRNLFGAYSRNMESNGGTSNKRQRLPYSPAELAAMEVRAMECIRQLLLRSAEALFLLQLLSQHHVTRLVQGFDASLQQALVQLTFNQLVCSEEGDRLATRLISALMEYYTGPDGRGTVDDISGRLREGCPSYYKESDYKFFLAVEALERAAVTLDAAEKENLAREAFNLLSKVPESADLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAYNDEIDVTVKEQALAQREQCYEIIISALRSLKGDSSQKEFGSPIRSASSQSVLDPSSRKKYICQIVQLGVQSPDRIFHEYLYRAMIDLGLENELLEYGGPDLLPFLQSAGRESIQELRAVSATTSPLGQSGAPMSSNQIKYYELLARYYVMKRQHMLAAHALLRLAERRFIDGVPTLEQRCQYLSNAVVQAKSASNSNGLVGSGRSSMDSGFLDLLEGKLAVLRFQIKTKEELEALVSRSEVLPATSDSAPNGLVPERSSTADANIANAAREKAKELSSDVKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSILRETWARLIDQALSRGGIAEACSVLKRVGPRIYPGDGAVIPLDTICLHLEKAALERLSSGVETVGDEDVARALLSACKGAAEPVLNTYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSVVAQRIGTSPTGASLILSGGFSLERTVVNQGARDKIASAANRYMTEVRRLALPQSQTEAVYRGFKELEESLISPYSFDRF 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0440 1484 Gene3D - 1180 1416 IPR042538 -
Sto11g0440 1484 Gene3D - 893 1053 IPR042533 -
Sto11g0440 1484 MobiDBLite consensus disorder prediction 300 323 - -
Sto11g0440 1484 Coils Coil 1232 1252 - -
Sto11g0440 1484 MobiDBLite consensus disorder prediction 303 323 - -
Sto11g0440 1484 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 875 1291 IPR007187 -
Sto11g0440 1484 Gene3D - 531 882 - -
Sto11g0440 1484 Gene3D Nucleoporin, helical domain, central subdomain 1056 1153 IPR042537 -
Sto11g0440 1484 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1481 IPR004870 GO:0005643|GO:0006913|GO:0017056
Sto11g0440 1484 Pfam Nup133 N terminal like 54 543 IPR014908 -
Sto11g0440 1484 PANTHER BNAC05G49530D PROTEIN 2 1481 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0440 11 5576103 5590150 Sto11g0440 11 5576103 5590150 ECH