Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0423 ATGGCTGCACTGCAGAGAGTGACACAGTCGAGCATGGCTACTGGTGTGAGCAGCTACGGCACCTGCAAAGGTGGTGGTGCTGCTGCTATTGAGAATGAAGTTTCTGAGAAATTCCCTTCTGGTTTGAGGGTTCTTGTTGTGGATGATGACCTCACTACCTTgagaattattgaaaaaatgtcTCTTAAGTGTCATTACCGCGTTACCACCTGTTCTGAGGCTACTGTTGCTTTGAATCTTTTGAGAGAGAGGAAAGGCTGTTTTGATGTGGTACTGAGTGATGTTCATATGCCGGACATGGATGGTTATAAACTCCTGGAACATGTTGGGCTGGAGATGGATCTTCCTGTTATCATGATGTCTGCTGATGCTAGCACAAGTGCTGTTATGAAGGGAATTAGACATGGAGCTtgtgattatttaattaagCCTGTTCGTGAGGAAGAATTGAGGAATATATGGCAGcatgttgttagaaaaatgTGTAATGAAAATAAAGAACATGAAAATTCTTGCAGCTTGGAAGATAATGATCGGAATAAACGAGGAAATGATGATACTGAGTATGCTTCATCTGTCATTGATACAGCAGAAGGGACGGCAAAATTGTCAAAAAAGAGGGGCAGTttgaaagaagatgatgatgatgaactaGAGAATGAAGATCCATCCACATCTAAGAAGCCCCGTGTAGTCTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTGAACCAACTTGGGCTTGACAAGGCTGTACCAAAGAGGATTCTTGAATTGATGAATGTCCCTGGTTTGACAAGAGAAAATGTTGCAAGTCATCTGCAGAAGTATCCAGATCTTGTTAATGCTGTCATTGTGAATTGCGATATTGAGTGGCAGAAATTTAGGCTTTATTTAAAGAGAATAAATGGAGCAGCACAGCAGCAGAATGGGATTACAAACACGGTTTCTGGATCTATGGAGTCCAAGCTAGGTGGGCTTGGAAGATTAGACATCCAAGCTCTGGCTGCTTCTGGCCAAGTTTCTCCTCAAACACTAGCAGCCCTTCATGCAGAACTCTTGGGTCGACCAACCACTAACTTGGTGCCAACAGTTGACCAGACTGCCCTTCTGCAGGCATCCATCCTGAGTTCCAAGCTTTACTCTGCGGAGCATGCTGTGGCATACGGTCAGCCTCTAGTAAAATGTCCTTCCATCATTGCCAAGGATTTTCCTCAGTCCATCCTAACTGTAGATGGTGTATCTTCTGGATATGGAGCATGGCCACCATCTAATACAATTGGTTCAGTGGGACGAAATAATAATCTTGGGAGGGCTAATAGTCCTGCTTCTGTCAACCAGAATGGCATCATTGCTAGGAACTCCCTAATTGATTATAGTCTACTTACGCCTCAATCAAATCATTCTTCATTAAATATTGCCCAGTTTCCTGGAGAGGTCACCAAAACTAGAGGTGTTCTTTGCGGGTACATGGCTCCTGGCTCCATTTCACCTGCAACATCAGCTCATTCAGTAGGCGCTAACAATAGCAATATCCAGCAGCTTCAGAACTCAACTTTGACATTTGGTTCTGTGAGACCTATGCCAGCTCTTGCATCAAATGTGTCTGATACGCAAGTTTCCTATAGTGGTACTAAATCTGGTGATGCAATGGATCAAGCACCTGCTAGGAATCTTGGATTTGTTGGCCAAGGTACCAGCATTCCAAGTAGGTTTGCTGCTCATGAAATTGAATCTTCTGTAAGTGACTTTAGTCAAGGAAAAATCTCTGTAGACAGCAATGGTAACACAGTAAAGGAGGAGCCCAGTATGAATGCGTTCACTGAATAG 1836 0.4216 MAALQRVTQSSMATGVSSYGTCKGGGAAAIENEVSEKFPSGLRVLVVDDDLTTLRIIEKMSLKCHYRVTTCSEATVALNLLRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADASTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKMCNENKEHENSCSLEDNDRNKRGNDDTEYASSVIDTAEGTAKLSKKRGSLKEDDDDELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKYPDLVNAVIVNCDIEWQKFRLYLKRINGAAQQQNGITNTVSGSMESKLGGLGRLDIQALAASGQVSPQTLAALHAELLGRPTTNLVPTVDQTALLQASILSSKLYSAEHAVAYGQPLVKCPSIIAKDFPQSILTVDGVSSGYGAWPPSNTIGSVGRNNNLGRANSPASVNQNGIIARNSLIDYSLLTPQSNHSSLNIAQFPGEVTKTRGVLCGYMAPGSISPATSAHSVGANNSNIQQLQNSTLTFGSVRPMPALASNVSDTQVSYSGTKSGDAMDQAPARNLGFVGQGTSIPSRFAAHEIESSVSDFSQGKISVDSNGNTVKEEPSMNAFTE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0423 611 MobiDBLite consensus disorder prediction 166 188 - -
Sto11g0423 611 SMART REC_2 42 154 IPR001789 GO:0000160
Sto11g0423 611 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 228 279 IPR006447 GO:0003677
Sto11g0423 611 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 429 - -
Sto11g0423 611 PANTHER TWO-COMPONENT RESPONSE REGULATOR 432 549 - -
Sto11g0423 611 SUPERFAMILY CheY-like 40 165 IPR011006 -
Sto11g0423 611 SUPERFAMILY Homeodomain-like 225 281 IPR009057 -
Sto11g0423 611 CDD REC_typeB_ARR-like 44 158 - -
Sto11g0423 611 Pfam Response regulator receiver domain 44 153 IPR001789 GO:0000160
Sto11g0423 611 ProSiteProfiles Response regulatory domain profile. 43 158 IPR001789 GO:0000160
Sto11g0423 611 PIRSF RR_ARR_type-B 23 280 IPR017053 GO:0003677|GO:0003700|GO:0009736
Sto11g0423 611 PIRSF RR_ARR_type-B 294 610 IPR017053 GO:0003677|GO:0003700|GO:0009736
Sto11g0423 611 Gene3D - 224 282 - -
Sto11g0423 611 PANTHER TWO-COMPONENT RESPONSE REGULATOR 432 549 IPR045279 GO:0009736
Sto11g0423 611 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 429 IPR045279 GO:0009736
Sto11g0423 611 Pfam Myb-like DNA-binding domain 230 279 IPR001005 -
Sto11g0423 611 MobiDBLite consensus disorder prediction 166 227 - -
Sto11g0423 611 Gene3D - 34 166 - -
Sto11g0423 611 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 225 284 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0423 Sto-Chr11 5438848 5444189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0423 76 359 Response Regulator Gene Family AT3G16857 52.159 1.81e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Sto11g0423 Response_reg 2.9e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0423 11 5438848 5444189 Sto11g0423 11 5438848 5444189 ECH