LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto11g0421	ATGGGTAGAACAATTGAGTTATATGGATTCCCTTCCAATGTGACTTGGTTTGATGTACAGACATTTGTAGAAAACTATACCGGTAAAGGAACTATCGATGCTATTAAGATAAGGCAAGGCAAGGGTCGTAAAGCAAGAGCATTTGCTATAATTCAATTCACAACCACAAAAGAAGCTTCTGTAATCATCTCCTTAGCTAACAGGATATCAATGTATTATGGATCTTCTTATCTGAAGGCTCGGGAACTGGAAAAAGATATTGTGTCAAAGCCAAGAACTCTTTTGCATAGCTTGGAGGATGTGAAACTGCATTTTGGCTGTCAGATCTCAAAGGAAGGATTCTGTTTTCTATGGACAAAGGTGAAAGTCCGTGTAGAATTTGGGATTAGAATGAAAAAGTTACATTTCTTTCTGTCTCATGAAGGGGTTGATTATAAACTTGAGCTTTCTTATGAGAACATTTGGCAGATTGAGCTGCATCGATCAAGGGAGCAAAATCGAAAGTATCTTCTGATTCAGTTACTTGGTGCTCCTCGGGTTTTTGAAAAAGATGTACGTGGTTCAAGAAATATATATGAAGATCCTACATTCAACTATTATAGAGATACTCCTGTTGAGCATTGGATCCGGACAACAGATTTCACTCCTTCATTCTGCATTGGGCAGTCTTCTGCTTTATGTTTGGAATTTCCTATTGGCCAAACTCTTCCCAATTTCAAGGAAAACTTTGTTTATTATAAGGAAAGTGAGAGGAACTACACTTTAGAGAGAGGATTTCCTTTTTCCAGCAATTTGGATCTTGTCCCTATTGTTGCTCCTCCTCAAGGTTTCAAAATACCATATGACATCCTGTTTAAAGTTAACTCAGTGCTTCAGATAGGGTCTCTTGCAGGTCCAGCAATTGACAGTGACTTCTATTGTTTGGTTGATCCACATAGAGTGAACCGTGCATTTATTGAATATGCTTTGGATAAAATGTATTATTctaatgaattttattttgaaccaTCAAAGTGGATTTCTGAGCAGTATAGAAAGTACCATGCATATCAGAAGTATGCTCCCCCGTCGCCGGCTGTATCCTTAGATACTGGTTTGGTATATGTACGCAGGGTTCAGATCACCCCTTGTAAGGTGTATTTCTGTGGCCCAGAAGTCAATGTCTCAAATCGTGTTCTCCGCCATTTCCATGAATATATAGATAACTTTCTACGTGTTTCATTTGTGGATGAGGAGTTGAATAAACTGTTTTCAACAGATTTATCACCGCGCACATCTTCTTCAATTGAGCACAGGAAAACTGGAATCTATGCAAGAATTCTGTCCATTCTTAGAAATGGCATAGTAATTGGTGATAAGAAGTTTGAATTTCTAGCATTCTCATCTAGTCAATTGCGGGAAAATTCTTTATGGATGTTTGCTCCTACTAGTTGTGGACTTAATGCTACAGCCATAAGAAACTGGATGGGAAATTTTTGCCAGATTAGAAATGTGGCTAAGTATGCTGCTAGATTGGGGCAATCCTTTGGTTCATCTACTGAAACTTTAAGTGTTGGCCGGCATGAAATTGAAATTATTCCTGATGTGAAGGTTTGCCATGGTGGAATGAACTATGTTTTCTCTGACGGAATTGGTAAGATATCTGCTGATTTTGCTGGGAAAGTGGCTGTAAAATGTGGCTATAAATCTTCCGTTCCATCTGCCTTTCAGATTCGATATGGTGGATACAAAGGAGTTGTGGCCACTGACCCAACATCATCAGTGAAATTATCATTGAGGAAGAGCATGCTTAAGTATGAATCTGATAACACAAAATTAGATGTTTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAACCGACAAATAATTACTCTCTTATCTACTCTTGGTGTCAAGGATTGTGCTTTtgagaaaaaacaaaaagaagctGTAGATCAACTGAACGCCTTACTGACAGATTCATTGAAGGCTCAGGAGGCTCTCGACTTGATGTCTCCTGGGGAGATCTCTAATATTCTGAAGGAGATGCTCATTTGTGGTTATAGCCCTGATGCTGAACCGTTTCTTTCAATGATGCTGCAAACATTTAGGGCATCAAAACTGTTGGAATTGCGACTCAAAACTAGAATTTTTGTTCCAAAGGGAAGAGCGATGATGGGATGTCTAGATGAAACTAGAACCTTAGAATATGGTCAAGTATTTATCCAATTTTCTAACAACAGGTTCATACAGGAATATGACACTCCTTTCTATGGCTCTGAGAGGTCTTATATAGTTACAGGCAAGGTAGTTGTTGCAAAAAACCCATGCTTACATCCAGGTGATGTGCGTGTTTTAGAGGCTGTTCGTGTGCCAGCTCTGTTCCACATGGTTGACTGTGTTGTATTCCCACAAAAAGGACACAGgcCTCACCCAAATGAGTGTTCGGGAAGTGATCTCGATGGAGACATCTACTTTGTATGTTGGGACCCTGAATTGATTCCACCTCGCCAAGTCCCACCAATGGATTATACACCTGCCCCAACTATGGAATTGGATCATGATGTAATGATAGAGGAGGTTGAGGAGTATTTCGTCAACTACATAGTCAATGACAGTCTAGGAATAATTGCCAATGCCCACACTGTATTTGCAGATAGAGAGCCTGGGAAAGCAATGGCTGAACCATGTATTGAGCTTGCCAAGCTATTTTCAATCGCGGTTGATTTTCCAAAAACCGGTGTCCCGGCTGTTATACCTCCTCAACTTTATGTCAAAGAATATCCTGACTTCATGGAGAAGTCTGATAAAACGACCTATAAATCAGTCAATGTTATAGGGAAGCTTTTCAGGGAAGTGAAAGAAATTGCACCTAGTGCTAGCTCTGCACTAGTCTTCACCCGGGAAGTGGCTAGACGGTCCTATGACACTGATATGGAAGTCGAGGGCTTTCTGGATTATGTTGATGATGCTTTCTATCACAAAAGCAACTATGACTACAAGTTGGGGAATTTGATGGATTACTATGGGATCAAGACCGAGGCCGAAATTCTGAGTGGGAATATTATGAAACTGTCAAAATCTTTCACAAAAAGAAGGGATGCAGAGGCAATTAGCATGGCTGTAAAGTCCCTAAGGAAAGAAGCTCGGACGCCGTGGAACTGGCGAAGATTCTGGGAAAGATCATGTGCAGGCCAAAGCTTCTGCGTGCTTGTCACAATCAAGAAGGAGAAAGCCAGTATTAGAATGTCTCTTAATTTATCTTCCTTGGAGCACAAGATTCATGCCCTGCATTTGTATTGA	3285	0.3973	MGRTIELYGFPSNVTWFDVQTFVENYTGKGTIDAIKIRQGKGRKARAFAIIQFTTTKEASVIISLANRISMYYGSSYLKARELEKDIVSKPRTLLHSLEDVKLHFGCQISKEGFCFLWTKVKVRVEFGIRMKKLHFFLSHEGVDYKLELSYENIWQIELHRSREQNRKYLLIQLLGAPRVFEKDVRGSRNIYEDPTFNYYRDTPVEHWIRTTDFTPSFCIGQSSALCLEFPIGQTLPNFKENFVYYKESERNYTLERGFPFSSNLDLVPIVAPPQGFKIPYDILFKVNSVLQIGSLAGPAIDSDFYCLVDPHRVNRAFIEYALDKMYYSNEFYFEPSKWISEQYRKYHAYQKYAPPSPAVSLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEYIDNFLRVSFVDEELNKLFSTDLSPRTSSSIEHRKTGIYARILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMFAPTSCGLNATAIRNWMGNFCQIRNVAKYAARLGQSFGSSTETLSVGRHEIEIIPDVKVCHGGMNYVFSDGIGKISADFAGKVAVKCGYKSSVPSAFQIRYGGYKGVVATDPTSSVKLSLRKSMLKYESDNTKLDVLACSKFQPCYLNRQIITLLSTLGVKDCAFEKKQKEAVDQLNALLTDSLKAQEALDLMSPGEISNILKEMLICGYSPDAEPFLSMMLQTFRASKLLELRLKTRIFVPKGRAMMGCLDETRTLEYGQVFIQFSNNRFIQEYDTPFYGSERSYIVTGKVVVAKNPCLHPGDVRVLEAVRVPALFHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPRQVPPMDYTPAPTMELDHDVMIEEVEEYFVNYIVNDSLGIIANAHTVFADREPGKAMAEPCIELAKLFSIAVDFPKTGVPAVIPPQLYVKEYPDFMEKSDKTTYKSVNVIGKLFREVKEIAPSASSALVFTREVARRSYDTDMEVEGFLDYVDDAFYHKSNYDYKLGNLMDYYGIKTEAEILSGNIMKLSKSFTKRRDAEAISMAVKSLRKEARTPWNWRRFWERSCAGQSFCVLVTIKKEKASIRMSLNLSSLEHKIHALHLY	1094

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto11g0421	1094	PANTHER	RNA-DEPENDENT RNA POLYMERASE	2	1049	IPR007855	GO:0003968
	Sto11g0421	1094	CDD	RRM_SF	5	59	-	-
	Sto11g0421	1094	PANTHER	RNA-DEPENDENT RNA POLYMERASE	2	1049	-	-
	Sto11g0421	1094	SUPERFAMILY	RNA-binding domain, RBD	2	70	IPR035979	GO:0003676
	Sto11g0421	1094	Pfam	RNA dependent RNA polymerase	374	947	IPR007855	GO:0003968

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto11g0421	Sto-Chr11	5409255	5416750	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto11g0421	11	5409255	5416750	Sto11g0421	11	5409255	5416750	ECH