Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0398 ATGCAGGCCTCAGGTAACCATACTGATGAACAGCTTGAAGCGCTTTGCGAGTCTACAGTTACACCAAATTGGACAATCCATGTTTCAGATGTAAGAACAGTTAAGGTTAGCAACATATCACTGGCTACTTCTCAGAAGGATATTAGAGAATTCTTTTCATTTCCGGGTGATATTCTATATATTGAGATGCTAAGGGAGAGTGAGAACACTCAGGCTTCATATGTCACCTTTAAGGATTCACAAGGAGCAGATACAGCAGTGTTATTGACGGGTGCCAACATACACGATCACATTGTCACAATCACACCTGTTGAGAACTACCTGCTTCCTCCTGATGCTCTTCCATCAACTCCAAAAAAGCCAACTCCTGCAGCAGTTAAGAAGGCTGAGGCTATGGTGAGTACCATGCTTGCCAAGGGTTTCATTTTAGGAAAAGATGCAATCAAAAGGGCGAAATCCTTCGATGAACGCCATCACTTTACCTCAAATGCCTCAGCCACAGTTGCTTCCATTGATCACAAAATGGGTTTAAGTGATAAACTAAGCTTTGGAACAGCTATGTTTAGTGAAATCATGAAAGAGGTGGACGAAAAATTCCAGTTTTCTGAAATGACCAAGTCTGCTTATGCTGTTGCTGAACAGAAAGCAAGCACTGCCAGATCTGCTATCATGAGCAATTCGTACGTATTGACCGGAGCTTCATGGGTGTCAAGTGCCTATACTGCTGTTGCAAATGCAGTTGGGGATGTCAGTATGATGACCAAAGAGAAGGTTGAACAAGCTGAGATGGAAAAGAGGGAAATTATTTACAAGGAAGGCGCTGGTGgtattgataaatttgggaaGATGCATTATGATGGATCTTCAGCTGCAGGTCTTCCAGTGTTTTCTGTGAATTCAGGAAATGGTGGTAAGATGGGAACTATATGA 930 0.4183 MQASGNHTDEQLEALCESTVTPNWTIHVSDVRTVKVSNISLATSQKDIREFFSFPGDILYIEMLRESENTQASYVTFKDSQGADTAVLLTGANIHDHIVTITPVENYLLPPDALPSTPKKPTPAAVKKAEAMVSTMLAKGFILGKDAIKRAKSFDERHHFTSNASATVASIDHKMGLSDKLSFGTAMFSEIMKEVDEKFQFSEMTKSAYAVAEQKASTARSAIMSNSYVLTGASWVSSAYTAVANAVGDVSMMTKEKVEQAEMEKREIIYKEGAGGIDKFGKMHYDGSSAAGLPVFSVNSGNGGKMGTI 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0398 309 Gene3D - 28 102 IPR012677 -
Sto11g0398 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 97 IPR000504 GO:0003723
Sto11g0398 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Sto11g0398 309 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 14 304 - -
Sto11g0398 309 SUPERFAMILY RNA-binding domain, RBD 27 105 IPR035979 GO:0003676
Sto11g0398 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Sto11g0398 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 14 304 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto11g0398 Sto-Chr11 5068920 5071427 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0398 11 5068920 5071427 Sto11g0398 11 5068920 5071427 ECH