Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0395 ATGgtgGGACATAGTCTTGTTGTGCCTGAAGAAAGGAAGAGTGAATCAGATTGGCTTAATATTCTTTTGCATAGTAACTTTGGCCATTGTGATGATCATCAAGATCTTCGTTACAATGAGAAGAATGTTTTCTGTATAGACTGTAAAATTAGCTTATGCAGGCATTGCAAGGAAGCTCATGGCCTTCATAGAAGACTCGAACGTGAGATGAGTATTGCTTGTTTAGCTTTGGTAGTAACATTGATGATCATAtcatttatgACATACATATCCAATAATGAAAAGATCATACATCTCAATCCTCGTCTCTCATCAAAGAGTACCAAAGCAACAACAAAAAGAGATAAAAGTGTTGATCTATGCCCTCAGTTTCAATCCCAAGATCATACCAAAATGTTAAACAAATCAAAGTCAGGTGGTACCTGTGAAGAATGTGGAAAACATTTACAAGATGAGCGTAATTGCTTCTGTTCTATATCATGCAAGATCTCAGTGGAGCCTAAGTCAATGAAATCTCCAAAACCAGAAGTGTCTGACCATTCATCTTTGAATGAAAATCAGAATTCAGAAACTGAGTCATCATCAATCTCTGAGGCAGAGCCATATGAATGGGTTGAAGTGGTGAATTTAAGAAAGCGCCCAAGAAAAGCCATCCCTCATAGATCtccttttgttttgatctcttaa 687 0.3566 MVGHSLVVPEERKSESDWLNILLHSNFGHCDDHQDLRYNEKNVFCIDCKISLCRHCKEAHGLHRRLEREMSIACLALVVTLMIISFMTYISNNEKIIHLNPRLSSKSTKATTKRDKSVDLCPQFQSQDHTKMLNKSKSGGTCEECGKHLQDERNCFCSISCKISVEPKSMKSPKPEVSDHSSLNENQNSETESSSISEAEPYEWVEVVNLRKRPRKAIPHRSPFVLIS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0395 228 Pfam PLATZ transcription factor 87 163 IPR006734 -
Sto11g0395 228 MobiDBLite consensus disorder prediction 176 198 - -
Sto11g0395 228 MobiDBLite consensus disorder prediction 168 198 - -
Sto11g0395 228 ProSiteProfiles Zinc finger B-box type profile. 25 68 IPR000315 GO:0008270
Sto11g0395 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 224 - -
Sto11g0395 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0395 Sto-Chr11 5036257 5038439 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sto11g0395 PLATZ 3.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0395 11 5036257 5038439 Sto11g0395 11 5036257 5038439 ECH