Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0350 ATGGAGAAACCCCATGGGAGTTTTGGGGTTTCGTTCTCATACCGTCTTCTTTTGATTCTTTCTATCATGATCGTCTTGGCTCAGTCTCAAGACGcggatgttatgaacattttaAGGGACGCAATCAACGGCTCAACCTCTCTTCCCCAATGGTCCGACTCGGATTTCTGCAAATGGAGCCACGTTCGTTGCAATTCCGCGAAACGGGTCGTCTCAATTCAGATTGGGAATCTGAACCTCAAAGGCTCACTCCCGAAGGAACTCTCGAAACTCACGGAGTTACGGCGCTTCGAGTGCCAATCAAACGGTCTCACAGGGGCATTTCCGTCATTACCCACTTCCCTCCAGAACCTCATCATCTACCACAATGGCTTCACCTCCATACCCCAAGATTTCTTCAAAGGCATGTCCAATTTACAAAAGGTGAGAATCGACTTCAACCCTTTTCCTCGGTGGAACGTTACCGAAACTCTCAGAGACTGCGTGGCGATCCAGACATTCTCGGCGGATAAAGCCAGTTTCTTCGGAGAAATTCCCGATTTCTTCGGCGCATTCCCAGGTTTGACCACTTTGTCCCTGCGCTTCAACCAATTCGTCGGTGGGTTGCCTTCCGGCTTGTCGGGTAGTTCAATAGAGTATCTATGGGTGAATGGGCAGGAGATTAAGCTTAATGGTACACTTGCGGTTTTACAGAACATGACCTCTCTGAAACTAATTTGGGTTAATGGGAATGCGTTTTCTGGTCCTATCCCTGATTTGTCCAATCATGATCAGCTATTTGATGTGAATCTAAGGGATAATCAATTGACCGGACCCACTCCTAAGTTTAAAACAGGAGTGAGTGTGGATATGATTGAAGGGACAAATCAGTTTTGTAGAAATGAAACTGGTCAGCCATGTAGTTCTATGGTGAATGCTTTGTTGTCTGTGGCTGAACCTCTAGGGTATCCCTTGAAGTTTGCTCAGAGTTGGAAGGGCAATGATCCCTGCGGTGGTAGTACTTGGTTAGGGATTGTTTGCGCCGGGGGAAACATTTTGGCTGTGAATTTTCAGAACATGGGTTTGTCTGGTACAATTTCTCCTAGTTTGGCCAGCCTCACATCTGTAAGAAGATTGCTTCTTGATAATAATAATCTCACCGGTACTATACCAAGTGAGCTTACTAGTATGCCTCTTTTGCAAGAGCTGGATGTTTCTATATATCGTTTATACGGCAAGGATAAACCTTCTGCTCCACTCAGTGCGCCTGACTCGGATTCTGGAGGTAATGGTAAGAAAAATAATTCTGCAGTCATTGTTGTGGTTGTGGTGGTTATTGTGGTATTACTTGGAGTGGCAATTTGGGGATTCATTTGGTTTAACAGAAAATGTAAGCATTCAGGCAAGTCGCAAGGTCCAACTCCAATTTTGGTGGAAGCTGGTAATATGGCAATTCCATTACAAGTTTTGAGAGGAGTCACTAACAATTTTTGCGAAGAGAACATTCTGGGGAGAGGTGGATTCAGCACTGTGTACAGAGGGGAATCGCATGACGGGACCAAGATAGCAGTGAAAAGAATGGAATCCGGAATGAGGGGCGAGAAGGGGCTGCGTGAGTTCGAGGCTGAAATCGCCGTACTCACCAAGGCTCGGCACAAGCACTTGGTTGCGCTTCAAGGGTATTGCTTGGATGCAAACGAGAGGCTTCTAGTGTACGAGTACATGCCTCAAGGGACTCTTAGTAGACATTTGTTCAGCTGGAAAGACGAAGAAGGGTTAAAGCCTCTGGAATGGACAAGAAGGCTTACCATTGCCTTGGATGTTGCTAGAGGGGTTGAATATCTTCATGGTTTGGCGCAGCGAAATTTCATTCATAGGGATCTCAAGCCATCAAATATTCTGCTCGGAGATGATATGCGAGCCAAAGTGTCGGACTTTGGATTGGTTCGGCTTGTTCCAGAAGATAAAACATCCATTGAAACTAGAGTTGCTGGAACTTTTGGATATCTTGCACCAGACCAACCGGAAGAGAACATCCATCTCGTTACATGGTTCCGAAGAATGCTAATAAACAACAAGGACGACGCCTTCCAGGAGGCGATGATCGACCCGACGATTGAAGTCAGTGATCAAGAAACTCGATCCAGTCTTAGCATCGTCGCGGAGTTGGCAGGCCACTGCTGCGCGAGTGAACCCTACCAGCGGCCGGACATGGGGCATGCGGTGAATGTGCTAGCACCTCTTGTTGAGAATTGGAAACCTGCGGAAGAAAATTCAAATGACACTATAAGTGGAATTCACCTAGAAATGAGCTTAACCTTACCACgagaataa 2313 0.4596 MEKPHGSFGVSFSYRLLLILSIMIVLAQSQDADVMNILRDAINGSTSLPQWSDSDFCKWSHVRCNSAKRVVSIQIGNLNLKGSLPKELSKLTELRRFECQSNGLTGAFPSLPTSLQNLIIYHNGFTSIPQDFFKGMSNLQKVRIDFNPFPRWNVTETLRDCVAIQTFSADKASFFGEIPDFFGAFPGLTTLSLRFNQFVGGLPSGLSGSSIEYLWVNGQEIKLNGTLAVLQNMTSLKLIWVNGNAFSGPIPDLSNHDQLFDVNLRDNQLTGPTPKFKTGVSVDMIEGTNQFCRNETGQPCSSMVNALLSVAEPLGYPLKFAQSWKGNDPCGGSTWLGIVCAGGNILAVNFQNMGLSGTISPSLASLTSVRRLLLDNNNLTGTIPSELTSMPLLQELDVSIYRLYGKDKPSAPLSAPDSDSGGNGKKNNSAVIVVVVVVIVVLLGVAIWGFIWFNRKCKHSGKSQGPTPILVEAGNMAIPLQVLRGVTNNFCEENILGRGGFSTVYRGESHDGTKIAVKRMESGMRGEKGLREFEAEIAVLTKARHKHLVALQGYCLDANERLLVYEYMPQGTLSRHLFSWKDEEGLKPLEWTRRLTIALDVARGVEYLHGLAQRNFIHRDLKPSNILLGDDMRAKVSDFGLVRLVPEDKTSIETRVAGTFGYLAPDQPEENIHLVTWFRRMLINNKDDAFQEAMIDPTIEVSDQETRSSLSIVAELAGHCCASEPYQRPDMGHAVNVLAPLVENWKPAEENSNDTISGIHLEMSLTLPRE 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0350 770 Gene3D Ribonuclease Inhibitor 28 298 IPR032675 -
Sto11g0350 770 Pfam Protein kinase domain 492 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0350 770 SMART serkin_6 490 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0350 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Sto11g0350 770 SUPERFAMILY L domain-like 304 405 - -
Sto11g0350 770 PANTHER OSJNBA0070M12.3 PROTEIN 667 765 - -
Sto11g0350 770 PANTHER OSJNBA0070M12.3 PROTEIN 9 471 - -
Sto11g0350 770 PANTHER OSJNBA0070M12.3 PROTEIN 471 666 - -
Sto11g0350 770 Gene3D Phosphorylase Kinase; domain 1 454 567 - -
Sto11g0350 770 SUPERFAMILY Protein kinase-like (PK-like) 468 738 IPR011009 -
Sto11g0350 770 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Sto11g0350 770 Pfam Leucine rich repeat N-terminal domain 305 340 IPR013210 -
Sto11g0350 770 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 9 471 - -
Sto11g0350 770 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 471 666 - -
Sto11g0350 770 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 667 765 - -
Sto11g0350 770 ProSiteProfiles Protein kinase domain profile. 490 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0350 770 Gene3D Transferase(Phosphotransferase) domain 1 568 745 - -
Sto11g0350 770 SUPERFAMILY L domain-like 50 275 - -
Sto11g0350 770 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Sto11g0350 770 Gene3D Ribonuclease Inhibitor 302 413 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0350 Sto-Chr11 4557548 4560384 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0350 79 751 Receptor kinase-like Gene Family AT1G55610 27.024 1.31e-56 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Sto11g0350 Pkinase 1.4e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0350 11 4557548 4560384 Sto11g0350 11 4557548 4560384 ECH