Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0345 ATGGTGCACTTGAGTTGGTCCATCTACAATGGTATGGATGCTGATAATAAAGTTAGGAGGAGAGAGATTCTGGTTAGCCTCTGTGAGCAAAGGGCCAGAATGTTGCAAGATCAATTCAGTGTTAGTGTTAACCATGTTCATGCCTTAGCCATTCTTGTTTCTACCTTCCATTACTACAGATTCCCATCTGCAATTGACCAGGAAACCTTTGCTGAGTACACAGCTAGAACTGCATTTGAGCGGCCATTGCTGAATGGGGTGGCCTATGCACAAAGGGTAGTTGACACTGAAAGAGAAACCTTTGAGAGGCAGCATGGATGGGTGATAAAGACAATGGGAAGGGAGCCTTCTCCGGTCCGAGACGAGTATGCGCCGGTGATATTTTCACAAGAAACTATAGCTTATCTTGAATCTCTTGACATGATGTCAGGGGAGGAGGACCGAGAAAACATTCTGAGGGCTAGGGCCACTGGGAAAGCTGTTCTGACCAGCCCCTTCAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTGTTGACATTCCCTGTTTACAAATCTAAGCTCTCTACAAAGCCTACTGTGGAAGAACGGATTGAGGCAACTGCTGGATATGTTGGAGGATCCTTCGATGTTGAGTCCCTTGTTGAGAATTTACTTGGGCAACTTGCTGGTCACCAAGCAATTTTGGTGCACGTGTATGATGTCACAAACTCTACTAACCCACTAATCATGTATGGTAACCAATATGAAGATGGTGATAAGTCTCTTGTACATGTGCTTATCATAGTATTTTTGAACAGGTATCATCAGAAGGCACCAATACCATGGACAGCACTTACCACAACATTCCTGTTCTTTGTGATTGGTTTGTTAGTGGGATACATTTTATATGGTGCTGCAATTCATATTGTCAAAGTTGAGGATGATTTCCATGAAATGCAGGAACTAAAAGTTCGAGCTGAAGCAGCCGATGTTGCCAAATCCCAGAGTGTTCACATGCCATTTTGTTAA 1008 0.4395 MVHLSWSIYNGMDADNKVRRREILVSLCEQRARMLQDQFSVSVNHVHALAILVSTFHYYRFPSAIDQETFAEYTARTAFERPLLNGVAYAQRVVDTERETFERQHGWVIKTMGREPSPVRDEYAPVIFSQETIAYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLSTKPTVEERIEATAGYVGGSFDVESLVENLLGQLAGHQAILVHVYDVTNSTNPLIMYGNQYEDGDKSLVHVLIIVFLNRYHQKAPIPWTALTTTFLFFVIGLLVGYILYGAAIHIVKVEDDFHEMQELKVRAEAADVAKSQSVHMPFC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0345 335 Gene3D CHASE domain 65 271 IPR042240 -
Sto11g0345 335 ProSiteProfiles CHASE domain profile. 61 246 IPR006189 -
Sto11g0345 335 SMART CHASE_2 61 246 IPR006189 -
Sto11g0345 335 Pfam CHASE domain 64 244 IPR006189 -
Sto11g0345 335 Gene3D - 12 64 - -
Sto11g0345 335 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 328 - -
Sto11g0345 335 PANTHER HISTIDINE KINASE 4 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0345 Sto-Chr11 4544214 4547189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0345 4 328 Histidine Kinase Gene Family AT2G01830 77.910 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0345 11 4544214 4547189 Sto11g0345 11 4544214 4547189 ECH