Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0336 ATGATTGGAGGGAAGGATCTCCCCAATGGTCTTGACTCTGACGGGGAGAACTCTCGGAGCAAGCTTTCGAAGCCGAATTTCGACCGTCGGAAGGAGAATCCCGAAGAGAAATTAGGTTTCTTTCTGAAGGATTCAGAGGTGGGTGTTGATGGGATTCAATTGAAGCCCTCGCAATTAGTTGGGTCTTCGGCCTTACAAGAGTTGACTCTTAGCTACCTCTGTGACAACCCTAAGCTGGTTCTTCCGGAGAAGAAAGTAAGCTGCAACAAAGGTAAAGAAGTTATCATTTCTGAGAATTCAAATCAGGATGAGAAATGGGTGGAGAGAGATTTTCTGAATTTGAGTGAAACTAGGGAGAATTCTTCGAAGCGATCCATTGAAGATGAGGTTGAGAGGGAGAATAAGGACAAGAAGCCCAAGATGGAGACTCTAAATCTCTCTCTTGCTTTGCCTGATGTCTCACTTTCTCTCACAGCTTCAAACGCTCTACAAAACGGTGATCAGCCACTGAGGCCAAAGCCTAGCAGACCCTCAATGGCTACATATTCAAATGATTATACAGCGGCTTCTCTGTCATATTCGTATTCGCATCCCTTCTCGCATAACCCGAGTTGCTCGCTTACCCGTAATTCTACAGATTTTGATTATTCAGTCAGCAAAGATGATCATATTTGGAACTGTGGAGAAGGGACTAATGGATCAGTTCATAGTAGGTTCAAGCCAATAGGAGATGGGGTGGCCTTGTCTAATCATGGTGGTGGTGGGCTTAATTCCCTTATGCAGGGTAATAATAGTCAGTATAAAACTACAAAATTGCCTGCCAGGCCAAGATTTGAAGCTCAGTCAGGGGACTCAAGGGGAAGGAATTCTGAGAATCAGAGAGGATTGGAAGGTTTAGATAGTGGGAAAATTAGGAAGCTTACTAGACCTGAGAGAATTCTCAGAGAGATTGTTTTGGAGTCTGTCCCTGCCATGGCTGTGACATTTCAGGAGCTTACTGACGAAGTCGTTGCATCAACTAAGGAATACTTGAAGAAACTCATTGAAATACCTGACAAGAAAGATGAATTAATCAGCCTCCAAAATCGACTTGAGCGAAGATCTGACCTCACCAAGGAGGCTCTTTCAAAGTGCCACAAAGGTCAGCTAGAGATTTTAGTTGCTGTCAAGATGGGGCTTGCAAGCTTCTTATCTGGTAAAGTTCAATTCTCTGAGATGGTAGAGATTTTCTTGTATACAAGATGTAGAAATGTGAACTGCAAGAGCTTGCTGCCTGTTGATGACTGCGACTGCAAGATTTGCTCTGGAAATAAGGGATTTTGCAGCTCTTGCATGTGTCCTGTCTGTTTGAACTTTGATTGTGCGAACAATACATGCAGTTGGGTTGGTTGTGATGTTTGTTCCCACTGGTGCCATGCTGCCTGTGGCATTAAGAAAAATCTGATCAAACCTGGGCCTAGCTTGAAAGGTCCGTCAGGGACCACTGAAATGCAGTTTCATTGCATTGGTTGTGGACATGCTTCAGAAATGTTTGGGTTTGTTAAAGATGTGTTCATGTGTTGTGCAAAGGATTGGGGTCTAGAAACCCTGGCGAAAGAGCTTGACTGTGTAAGCAGGATTTTCAAAGGAAGTGAAGATCGTAAAGGGAAGGAATTGCATGTTAAAACTGATGACATGCTCTACAAGCTTCAAACTAAAATGGTATCTCCTTTGGATGCCTGCAATTACATCCTACAATTTTTCAGCTATGCAGATGGCATTTCAGACTTTCCTCCTGCTATATCTACAAAGGATTTGGCAGCTTCTCAAGCTAACCTTAGGAAGGAAGCAACATCTCTTTCACAATCTAATTCTCTAATGTCAAAATTTACTTATAATAACCCAAGCTATTCTAGGTCACAATATTTCAAGGCCTCCCTCTTAAGTGAACTGAAAAATGAGAGTGATTTCCAGTTGGGGGCTTTGTTAAGGAAAGGTGGGCTTGAAAGCTTGGAGAGCATTGTGAGGATAAAGGAAGCAGAAGCCAAAATGTTTCAAACCAAGGCGGACGAAGCGCGGAGAGAAGCCGAAGGATTCCAGAGGATGATAAGGACAAAGACTGCGCAGATGGAAGAAGAGTACGCCGAAAGGCTGGGGAAACTCTCGCTGCAAGAGACGGAGGAAACTCGGAGGAAGAAACTGGAGGAATTGAAAGTGTTGGAAAATTCTCACTGTGATTactataaaatgaaaatgagaatgcaaGCTGAAATTGCTGGTTTGTTGGAGAGAATGGAGGCAACAAAGCAGCAATGGGTCTAA 2301 0.4311 MIGGKDLPNGLDSDGENSRSKLSKPNFDRRKENPEEKLGFFLKDSEVGVDGIQLKPSQLVGSSALQELTLSYLCDNPKLVLPEKKVSCNKGKEVIISENSNQDEKWVERDFLNLSETRENSSKRSIEDEVERENKDKKPKMETLNLSLALPDVSLSLTASNALQNGDQPLRPKPSRPSMATYSNDYTAASLSYSYSHPFSHNPSCSLTRNSTDFDYSVSKDDHIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGGLNSLMQGNNSQYKTTKLPARPRFEAQSGDSRGRNSENQRGLEGLDSGKIRKLTRPERILREIVLESVPAMAVTFQELTDEVVASTKEYLKKLIEIPDKKDELISLQNRLERRSDLTKEALSKCHKGQLEILVAVKMGLASFLSGKVQFSEMVEIFLYTRCRNVNCKSLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIKKNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFMCCAKDWGLETLAKELDCVSRIFKGSEDRKGKELHVKTDDMLYKLQTKMVSPLDACNYILQFFSYADGISDFPPAISTKDLAASQANLRKEATSLSQSNSLMSKFTYNNPSYSRSQYFKASLLSELKNESDFQLGALLRKGGLESLESIVRIKEAEAKMFQTKADEARREAEGFQRMIRTKTAQMEEEYAERLGKLSLQETEETRRKKLEELKVLENSHCDYYKMKMRMQAEIAGLLERMEATKQQWV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0336 766 MobiDBLite consensus disorder prediction 1 35 - -
Sto11g0336 766 Pfam Coiled-coil region of Oberon 636 755 IPR032535 -
Sto11g0336 766 MobiDBLite consensus disorder prediction 254 302 - -
Sto11g0336 766 MobiDBLite consensus disorder prediction 162 182 - -
Sto11g0336 766 Coils Coil 744 764 - -
Sto11g0336 766 Coils Coil 716 736 - -
Sto11g0336 766 CDD PHD_OBE1_like 445 504 - -
Sto11g0336 766 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 14 766 IPR004082 -
Sto11g0336 766 MobiDBLite consensus disorder prediction 17 35 - -
Sto11g0336 766 MobiDBLite consensus disorder prediction 117 140 - -
Sto11g0336 766 Coils Coil 668 702 - -
Sto11g0336 766 Pfam PHD - plant homeodomain finger protein 415 538 IPR032881 -
Sto11g0336 766 PANTHER PROTEIN OBERON 3 14 766 - -
Sto11g0336 766 MobiDBLite consensus disorder prediction 254 271 - -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 328 350 IPR004082 -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 367 382 IPR004082 -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 406 427 IPR004082 -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 452 472 IPR004082 -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 525 544 IPR004082 -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 662 682 IPR004082 -
Sto11g0336 766 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 701 723 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0336 Sto-Chr11 4397465 4401505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0336 415 571 PHD Gene Family AT5G57380 25.478 1.31e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0336 11 4397465 4401505 Sto11g0336 11 4397465 4401505 ECH