Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1837 atggaggagggTGTGTTGCCGAATCCCATAGAGTGTCTGGGTAAAGGGTTTGATCTGACAAGTGATTTTCGATTGAAATTTGCAAAGGGAAAGGGAGGTAGGAGGTTGGTTGTGCTTGACGAAGTGAACAAGAGGGACATTACGGTTCCTGGGGGAGCTACCATTCCAAATGTTTCCGAGGATATTCGCTGTGACAAGGGGGATCGACTCCGCTTCAAGTCTGATGTCCTTCAATTCAACCAGATGTCTGAGTTGCTTAATCAAAAATCAGCTATACAAGGAAAAATTCCTTCTGGCTATTTTAACGCTCTTTTTGATTTGAGTGGTGATTGGTTTCGTGATGCTCATGACATCAAATATCTTGCTTTTGATGGTTATTTCATTTCACTGTACTATTTGCATCTTACTGCTTCGCACCTGATACTGCAAGAGGAAGTTAAGAAGTCTGTTCCAGCTCAATGGGATCCTGCTTCATTATCCAGGTTCATTCAGACATACGGTACACACATAATAATAGGTATGGCTGTTGGAGGTCAGGATGTAATCTGTGTCAAACAAAAGCATTGTTCAAAGGTTCCACCTGGTGATCTAAGAAGACATTTAGAGGATGTAGgagattttttgttttcagaTTTAAGAAGCCCTTCTCAGCTACAAAGGAACACCACAGAAGGCAAACAAAAAGTTCCTGAAGTCTTTAATCGTGTGATGCAATCAAGCACAACGCAGTTCACCAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACTATCATTTGTTCGAAAAGAGGAGGAGATGTGTTCAAGCACAGTCACTCAAATTGGCTCCAGACAGTGGCTTCTAATCCTGAAGCAATTCTCTTCAAGTTTGTACCTATTTCCTCACTTCTGACAGGGATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCCCCTCCCGAAGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTACGAGCTACCTCTGAGGCATCAAAGGAAAAAGACTTCTTCCCCCTCCCTGCAATTTGGTTTCTTGTGTCCCAAGCTACATGTCAGCTCTGCACAGGTAGTAAGTGAACAAAAACCTGTGGTAGGCCTCCGCTTGTACTTGGAAGGCAGAAAATGTGATAGACTTGCAATACATGTACACCATCTTTCAAGCCTCCCAAACACAATGATCCACTCTTCAGGCACATCTTTGTGGCGAGGATCTGATGATACTGAATCCAGTGACAACTTTTTGGAACCAATAAGGTGGAAGGGATTTGCAAACGTGTGCACCGCAGTGGTTAAGCATGACCCTAGCTGGTTGCATGAATCAAGTGGTGTTTACATTGTAACCGGTGCACAACTCGTTAGCAAAGGGAGTTGGCCAAAGAATGTGCTTCACTTGCGCCTCCTCTACACCCACATACCCAATTGCAGTATCAGGAAGTCAGATTGGGCTGGTGCACCAGAGGCTTCAAGAAAATCATCTTTCCTCACAAATCTGAGCACAACATTTTCATTCACACAGCAAACTGTCGCAGCTCCTCAGAAGCAGGCTCCAGCTGTACTTGACTCTGGTGTTTATCCAGATGGTCCACCTGTGCCTGTTCGTTCTGGCAAACTGCTTAAGTATGTGGATACAAGCGAGGTTGTGCGGGGCCCGCATGATGCTCCTGGCCATTGGTTGGTAACAGCTGCTAAGCTTGTCACAGAGGGTGGTAAGATTGGATTACAGGTCAAGTTTGCATTGTTAGACTACTAG 1797 0.4368 MEEGVLPNPIECLGKGFDLTSDFRLKFAKGKGGRRLVVLDEVNKRDITVPGGATIPNVSEDIRCDKGDRLRFKSDVLQFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWFRDAHDIKYLAFDGYFISLYYLHLTASHLILQEEVKKSVPAQWDPASLSRFIQTYGTHIIIGMAVGGQDVICVKQKHCSKVPPGDLRRHLEDVGDFLFSDLRSPSQLQRNTTEGKQKVPEVFNRVMQSSTTQFTSISETSSKDGLTIICSKRGGDVFKHSHSNWLQTVASNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPEDLQCFLEFQIPRQWAPMFYELPLRHQRKKTSSPSLQFGFLCPKLHVSSAQVVSEQKPVVGLRLYLEGRKCDRLAIHVHHLSSLPNTMIHSSGTSLWRGSDDTESSDNFLEPIRWKGFANVCTAVVKHDPSWLHESSGVYIVTGAQLVSKGSWPKNVLHLRLLYTHIPNCSIRKSDWAGAPEASRKSSFLTNLSTTFSFTQQTVAAPQKQAPAVLDSGVYPDGPPVPVRSGKLLKYVDTSEVVRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1837 598 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 327 IPR020864 -
Ssu9g1837 598 PANTHER OS02G0475300 PROTEIN 8 598 - -
Ssu9g1837 598 Pfam MAC/Perforin domain 101 313 IPR020864 -
Ssu9g1837 598 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 8 598 IPR044663 GO:0006952|GO:0012501|GO:2000031
Ssu9g1837 598 SMART MACPF_8 118 315 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1837 Ssu-Chr9 55752195 55756588 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1837 9 55752195 55756588 Ssu9g1837 9 55752195 55756588 ECH
Ssu9g1837 9 55752195 55756588 Ssu5g2350 5 66243467 66248188 PCT