Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1810 ATGGGTTCATTCCAGACACCTATTGGAATGAGAAGTTCCACATTGCTAGAGACTTCATGTGGATTCCTGTTACAGGAACTGCAGATAATATGGGATGAAGTTGGAGAAGATAAGTTCGAAAGGGAGAAGGTTCTGCTAGATTTGGAGCAAGAGTGCCTCGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAACTCGTCTGCATCAGGAATTGGCCGAGGCTGAGGCTGAATTTACCCACCTTCTTTTGTCCCTTGGTGAACGATCTCTGCCTGGACGGCCGGAGAAAAGGGCAGGTACACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTCCGGGAAATGCGCTTGAGGAAAGAAGAGAGGTTAAACCAATTCCGAGCTGTGCAAggtcaaattcaaaaaatttctgcAGAAATTGCAGGTAACTCAAACAATGAACCCTCAACCATTGTAGTAAACGAGAATGATCTTTCACTAAAAAGACTAGAGGAGTATCAGAATGAGTTGCAAAGACTTTACAATGAGAAGAATGAAAGACTTCAGCAAGTGGAGAAATATATAGACATAATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCTGCAATCATCATGGAAGTTCATCCAAGCTTAAATGATTTATGtggaataacaaaaaatataagtgaCACTATCTTAGATAAACTCAATATCACAGTGGAATCCCTTTTCGAAGAAAAGCAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCACTGTCAAATCTATGGAATCTTATGGACACACCATACCGTGAACGACAATCTTTTTCCCATGTAATCAATTTGTTGTCACTTGCATCTGCAGAAGTAACAGATCCAGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTCAAGCTGAAGTAAAGAGACTGGATCAACTTAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAACTGGAATTAATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGatgaacaatataattaacctCATAACCTCAGGGGAGATTGACCATTCCGATCTCCTCCTGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCTTCTAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGTTGGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAgCTTTGGTAGatttactaataaaaatgaCTAGGAGttgggaagaagaaagaaataaagttttcttGTATGATCAGGTACCTCTAATGGCCATATTGGAAGAATATAACATACTAAGGCGAGAAAAGGAGGAGGATACAAAAAGACAGCAACCGTGGGAAAAAAAGAGGATTCAAAGCCAAGTAATTGACCGAGATAATACATATGCATCAAGACCCGGCACCAGCAGTAGGCGCCTTCCAAGTAGAAGTGTGAATGGAGTTCTAGACAGTTCTGTGGCCACGAACAGAAGGCTTTCTATGGGTATCCAACAGCTGGGATCCAACAGCATAAATTCAGGAAATCACGGCGTGTCCTTCATCAAGGATGGAAGGAATGCCGTAAGAAAAAGATTTTCGGCGAACCTGCCTTCACTTCTCATACAAGAGACTGAGGCATCTTCTGTGGTGTCAACACATTCTGCACCATTTTCCccttaa 1785 0.4045 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRTRLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALREMRLRKEERLNQFRAVQGQIQKISAEIAGNSNNEPSTIVVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDIIHSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKQNRLDKLHHLGKALSNLWNLMDTPYRERQSFSHVINLLSLASAEVTDPGSLTLEIVQQTQAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLITSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERNKVFLYDQVPLMAILEEYNILRREKEEDTKRQQPWEKKRIQSQVIDRDNTYASRPGTSSRRLPSRSVNGVLDSSVATNRRLSMGIQQLGSNSINSGNHGVSFIKDGRNAVRKRFSANLPSLLIQETEASSVVSTHSAPFSP 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1810 594 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 594 - -
Ssu9g1810 594 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 519 - -
Ssu9g1810 594 MobiDBLite consensus disorder prediction 479 497 - -
Ssu9g1810 594 MobiDBLite consensus disorder prediction 479 518 - -
Ssu9g1810 594 Coils Coil 301 321 - -
Ssu9g1810 594 Coils Coil 60 80 - -
Ssu9g1810 594 Gene3D - 372 506 - -
Ssu9g1810 594 MobiDBLite consensus disorder prediction 498 518 - -
Ssu9g1810 594 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 594 IPR007145 GO:0000226|GO:0008017
Ssu9g1810 594 Coils Coil 159 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1810 Ssu-Chr9 55440571 55444700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1810 12 555 EF-hand Containing Proteins AT5G62250 37.365 3.59e-96 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1810 9 55440571 55444700 Ssu9g1810 9 55440571 55444700 ECH