Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3433 ATGGGCGTGTCTTCAAATGAATCGATACAATTATGCATTTTTGATTTGAGGAGAGGGCAACACGAAGGGCAAGAGCTGGATAAgatcctcttcttcttccccgCTGGTTTGTCCTTCTCAAAGCAACTTTCCGTCATTGGCCTCAGCGAAGGACTCATCACTTTTACAAGAATCTTCTCTCCAGAGGCTGCTTGCGAGGTCATCGAAGCAGAAAGACATTCTCATGTTTTCTACGAGGCCGAACCCGATATCTGGATGGTCATGGTGGTGGAGAAAAGCAATGATTCAGAACCTATATGGAGAGATGATGCATTGAGAAAAGTTCTCAAGGAAATTCACTCACTTTTTGTGATGTTTCATGGATCTATTAGAGCAATGCTGGAGAAAGAACCAGGTGGAGGACTAACAAGACGCCATTTATATTCCTTTATCATGGATTATCTGAGGGATTTTCTTGTGGGGAAAAAGCTCCTTTTACCATCATTCCGTGATTGCTTAAAGGAACGTGGAACTGTGCAGATGCTGACGATAGGTCGGGAGGCTGCAATTGAGGTTCAgTCGCTTGTCAGGGTGCTTGAATCTTCTACTGGAAACACTCCCTGCTactctttgattttatttcaagACCTGCTAGTGTCCACAACTCTATCTCCTGTTGACTCCGCATGCTCTATCTTCTGGAACAAGTTCCTGGTCCTACTTACGGAAAGGAAGTACTGCATCCAATGTTGCTACTGA 738 0.4201 MGVSSNESIQLCIFDLRRGQHEGQELDKILFFFPAGLSFSKQLSVIGLSEGLITFTRIFSPEAACEVIEAERHSHVFYEAEPDIWMVMVVEKSNDSEPIWRDDALRKVLKEIHSLFVMFHGSIRAMLEKEPGGGLTRRHLYSFIMDYLRDFLVGKKLLLPSFRDCLKERGTVQMLTIGREAAIEVQSLVRVLESSTGNTPCYSLILFQDLLVSTTLSPVDSACSIFWNKFLVLLTERKYCIQCCY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3433 245 PANTHER VACUOLAR FUSION PROTEIN CCZ1 HOMOLOG B 4 222 - -
Ssu5g3433 245 PANTHER UNCHARACTERIZED 4 222 IPR013176 GO:0016192|GO:0035658
Ssu5g3433 245 Pfam First Longin domain of INTU, CCZ1 and HPS4 12 121 IPR043987 GO:0016192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3433 5 84805817 84808825 Ssu5g3433 5 84805817 84808825 ECH