Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3416 ATGGCGGAGGTTTCCAGCGAGGGCGGAGCGGAGGCGACGGTGGCGACGCCGGCGCCGTTGGTGGCGTCTGGATCGTTCAAGGAAGGGAAGAGCTCGTCGCGGAGGCGCGCGCATTCGATGAGGCCGAGTCTCGAGGCGGACGAGTTCATGAACCTGTTGCACGGTTCGGATCCGGTGAAGGTGGAGCTGAATCGGTTGGAGAATGAAGTTAGAGATAAGGACAGAGAATTATCAGAAGCGCAAGCAGAGATCAAAGCCTTGAGGCTCTCCGAACGACTCCGAGAAAAGGCCGTTGAAGAGCTTACTGAAGAATTGTCAAAGGTTGAGGGGAAGCTGAAGTTAACTGAATCTCTTCTAGAAAGCAAAAAtcttgaaataaagaaaatcaatgatgAAAAGAAAGCTTCGATGGCAGCTCAGTTTGCAGCTGAAGCCACTCTTCGAAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCTATAGAGGCCATTCTTGCTCCTCTAGAGGCCGAACTTAAGCTTGCACGGCAAGAGATTGCCAAACTTCAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCAGCACTTCTTGAAGCTGAGAAGACTGTACAGATTGCCTTGGCTAAAGCCTCCATGGTGGATGAtctccaaaataaaaatcaagagcTAATTAAACAGATTGAGATTTGCCAGgaagaaaataaaattttggacaaaATGCATCGACTGAAGGTGGCAGAGGTTGAAAAGCTTACCCAAACTGTGAGAGAACTAGAAGAGGCTGTCCTTGCAGGTGGTGCAGCTGCTAATGCTGTGAGAGATTATCAGCGGAAAGTTCAAGAAATGAATgaagaaagaaaaactcttGACCGGGAGTTAGCTCGGGCCAAGGTAACAGCAAACAGAGTAGCTGTAGTGGTTGCAAATGAATGGAAAGATGCTAATGACAAAGTGATGCCTGTGAAACAATGGCTTGAAGAACGACGATTCTTGCAGGGAGAGATGCAGCATCTTCGGGACAAGCTTGCTATAACTGAGCGCACTGCTAAGTCTGAAGCACAGTTAAAAgaaaaatatcaattaaggCTTAAAGTCCTACAGGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGCACCTCAGAGGGAAGATGTGTTAGCAATGGGCCTTCTCGACGTCAATCCCTAGGTGGAGCTGATAACATCTCAAAACTAACTTCTAATGGGTTTCTAAAGAGATCACCGTCCACTCAAATTAGATCTTCTGTGTCTTCAAGTACAGTTTTGAAGCATGCTAAAGGCACATCTAAATCATTTGATGGTGGCACAAGGTCATTAGAAAGGAGTAAAATTCTTCTAAATGGAAAACCTCCAAGTTACTCATTCAACCAGTCTTCTGAAGGAACCAAAGACAGGGAGGAAAATGATAATTGGAAAGGAAATTCAAATGATAAGTCAAATGACTTCCCAACAGTGGATACAATGGATAGTGTTCCAGGAGTTTTGTATGATTTGTTGCAGAAAGAGGTCTTAGCTTTGAGGAAAGCTGGCCACGAGAAAGATCAAAGcctaaaagataaagatgatgCCATTGAAATGCTAGCAAAGAAAGTAGATACATTGACCAAAGCCATGGAAGTTGAGGCAAAGAAGATGAGAAGAGAAGTAGCTGCCATGGAGAAGGAGGTAGCTGCAATGCGTGTGGAGAAAGAACAAGAGAGCAGAGCAAAGCGTTTCAGCAATGTAAAGGGCCCTATGAACAGTGCTCAGCATCAGCTTGTTTCTGGAAGgtattgtttttctttgtttttgggtTTAATTCTTGTGTATTTTATTCAATGGAGTACTATGGCTTGCTGTTTTCTATAA 1887 0.4181 MAEVSSEGGAEATVATPAPLVASGSFKEGKSSSRRRAHSMRPSLEADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRLSERLREKAVEELTEELSKVEGKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAEKTVQIALAKASMVDDLQNKNQELIKQIEICQEENKILDKMHRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQHLRDKLAITERTAKSEAQLKEKYQLRLKVLQESLRETSNSINRGTSEGRCVSNGPSRRQSLGGADNISKLTSNGFLKRSPSTQIRSSVSSSTVLKHAKGTSKSFDGGTRSLERSKILLNGKPPSYSFNQSSEGTKDREENDNWKGNSNDKSNDFPTVDTMDSVPGVLYDLLQKEVLALRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVEKEQESRAKRFSNVKGPMNSAQHQLVSGRYCFSLFLGLILVYFIQWSTMACCFL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3416 628 Coils Coil 326 353 - -
Ssu5g3416 628 MobiDBLite consensus disorder prediction 379 499 - -
Ssu5g3416 628 Coils Coil 277 304 - -
Ssu5g3416 628 MobiDBLite consensus disorder prediction 29 43 - -
Ssu5g3416 628 Coils Coil 166 193 - -
Ssu5g3416 628 Pfam Microtubule-associated protein 70 47 596 IPR009768 GO:0007010|GO:0008017
Ssu5g3416 628 MobiDBLite consensus disorder prediction 379 448 - -
Ssu5g3416 628 Coils Coil 63 90 - -
Ssu5g3416 628 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 1 605 IPR009768 GO:0007010|GO:0008017
Ssu5g3416 628 Coils Coil 98 132 - -
Ssu5g3416 628 MobiDBLite consensus disorder prediction 473 487 - -
Ssu5g3416 628 Coils Coil 548 582 - -
Ssu5g3416 628 Coils Coil 361 381 - -
Ssu5g3416 628 MobiDBLite consensus disorder prediction 1 44 - -
Ssu5g3416 628 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 1 605 - -
Ssu5g3416 628 Coils Coil 218 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3416 Ssu-Chr5 84518326 84521624 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g3416 5 84518326 84521624 Ssu5g3416 5 84518326 84521624 ECH