Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2212 ATGAGTTCATACAGTACCACACTTTTTGCACACTTGTTTGGCCTCCTTGCCCTCATCCTCTTGCTCGTTTGGTTGCTGCATTACCGCGAGGGCATTGAATATGATTCTGAAAATGCACTTCGAGTTTTCAATGTTCACCCTTTTATGATGATCTTCGGGTTCATTTTCCTTGTTGGTCAAGCAATACTGGTATACCAAACGGTGCCAGGACAGCGTCAAACACATAAGATCATTCACATGACGCTTCATTTCATTGCTATAATTCTTGGGATTATTGGTATATGTGCCGTTTTCAAGTTCCATGATATGGTGAACTTGGAGGACGTTTACAGCCTCCATTCATGGATTGGCATTGGCACCTTTTGCCTCTTTGGCTTGCAGTGGCTTTTTGGACTGATGTTCATGCTTCAAGGATCTGCACAATCAAGGGCTGCGATTGCCCCATGGCACATAGCTGGTGGTAGAGCACTATTTTTCATGGCAATTTGTGCTGCACTAACAGGCTTGATGGAGAGGTATACCATGTTAAAACTACTGCCACACCAGAGAGAATCTCATTTGATCAACTTCACGGGTCTAGCAATTCTCTTGTTTGGAGTTTTTGTGGATATGTCAGTTGGTTTGGCCCGTTTTTCGTGA 639 0.4366 MSSYSTTLFAHLFGLLALILLLVWLLHYREGIEYDSENALRVFNVHPFMMIFGFIFLVGQAILVYQTVPGQRQTHKIIHMTLHFIAIILGIIGICAVFKFHDMVNLEDVYSLHSWIGIGTFCLFGLQWLFGLMFMLQGSAQSRAAIAPWHIAGGRALFFMAICAALTGLMERYTMLKLLPHQRESHLINFTGLAILLFGVFVDMSVGLARFS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2212 212 Gene3D - 1 209 - -
Ssu5g2212 212 SMART 561_7 45 169 IPR006593 -
Ssu5g2212 212 CDD Cyt_b561_ACYB-1_like 36 177 - -
Ssu5g2212 212 Pfam Eukaryotic cytochrome b561 45 173 IPR006593 -
Ssu5g2212 212 ProSiteProfiles Cytochrome b561 domain profile. 9 207 IPR006593 -
Ssu5g2212 212 PANTHER CYTOCHROME B561-RELATED 3 209 IPR043205 GO:0016491
Ssu5g2212 212 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2212 Ssu-Chr5 63344391 63345512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2212 6 212 Chloroplast and Mitochondria Gene Families AT1G14730 59.330 7.99e-86 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2212 5 63344391 63345512 Ssu5g2212 5 63344391 63345512 ECH