Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2208 ATGCAgagttattttctttcttttttcctttgcttGCTTAAACCTTTCGTCTTTCTTTTTATTCGgattttgattttggtgaagGAATTGGAATTCATCCACAAGAGTAGCAGCACCGTGGGTTACAGACCCAATGTCTTCTCCACCACTCTCTCCCATCTCATTGCTACCAACTCTTCCCACTTCATCATTCCTTTTATTCCCATCAGAGAAAGGTTGAAGGACAAGCTAGAGGAGTTTTTCAAATGTGAGTATGAGCTCTTCATTGAATTCACTGGTTTAATCAGTTGGAGCAGAGGAGCAAGCATTGGATGGCATAGCGATGATAACAGACCATACCTCAAACAACGCCACTTCTCAGCGGTGTGCTATTTAAATACTTATGGCAAGGATTTCGGTGGTGGACTCTTTCACTTCCAGGATGGTGAGCCCAACTCAATTGTGCCAACGGCCGGAGATGTTGTGATGTACACAGCTGATGACCGTAACATTCATtctgttgatgagATAACTGAAGGAGAAAGGCTCACACTTGCTTTATGGTTCAGTCGTGATGGCTCCCATGACGAAGATATGAAGctcatttctcttctttcaCAACACCTATTACATAAGAACATGGCTGATTCATACCTACCTTTGCCAGCATCCAGTAATATGTACTGGTTTTCTCAGGACCATGCTTCTGATTACCCATTCAGTTTTAACATATGCTGGGCTAGACTGCATGTTCTTGGatatcacatatatatttctCAAGACAGTAGCTGTGAGTCTGATGTCTCTGAATTAATGGTAAAGCCAGTGCGCTTAGTGAGGGGAAATGAGTTGCTAGACCAGGAATTTGTCAATATTATGCATGCACTTCAGATTGTCCATTTCTATTGTTGGAAAGGATCAGCTTTACAgaccaaattttcaaatatagaCTTCAAGGTAGTAAAAGTGACAGATGTGCAGAGAGCAAAAATCAGTGGTCTGAATTCTGTACTTTTGAATGATGATGATTTTGCATCCAGAGTTTTCTGTAGTATGCCTTCCAAAGAAATTGGATGCATTTGCTTTGACTGGTCAGGAATTGTGGCTGCAGTTGCTGCTTGGGAAGATTATGCGTTGAAGTTAAGCAAACAAATTCATCTACTGTTGCCTTACTGGAGAATAGATGGAGCTATATATAATGTGCAATTAGATGAGTAG 1197 0.3784 MQSYFLSFFLCLLKPFVFLFIRILILVKELEFIHKSSSTVGYRPNVFSTTLSHLIATNSSHFIIPFIPIRERLKDKLEEFFKCEYELFIEFTGLISWSRGASIGWHSDDNRPYLKQRHFSAVCYLNTYGKDFGGGLFHFQDGEPNSIVPTAGDVVMYTADDRNIHSVDEITEGERLTLALWFSRDGSHDEDMKLISLLSQHLLHKNMADSYLPLPASSNMYWFSQDHASDYPFSFNICWARLHVLGYHIYISQDSSCESDVSELMVKPVRLVRGNELLDQEFVNIMHALQIVHFYCWKGSALQTKFSNIDFKVVKVTDVQRAKISGLNSVLLNDDDFASRVFCSMPSKEIGCICFDWSGIVAAVAAWEDYALKLSKQIHLLLPYWRIDGAIYNVQLDE 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2208 398 Gene3D q2cbj1_9rhob like domain 62 202 - -
Ssu5g2208 398 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 88 184 IPR005123 -
Ssu5g2208 398 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 27 394 - -
Ssu5g2208 398 PANTHER LEPRECAN 1 27 394 IPR039575 GO:0032963
Ssu5g2208 398 Pfam 2OG-Fe(II) oxygenase superfamily 98 182 IPR044862 -
Ssu5g2208 398 SMART p4hc 8 183 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2208 5 63266601 63270747 Ssu5g2208 5 63266601 63270747 ECH